Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j20
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p pro...    32   0.64 
AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA...    32   0.64 
AE014298-1398|AAN09623.1| 1100|Drosophila melanogaster CG2990-PB...    31   1.9  
AE014298-1397|AAF46543.1| 1119|Drosophila melanogaster CG2990-PA...    31   1.9  

>AY051772-1|AAK93196.1|  673|Drosophila melanogaster LD29879p
           protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 389 RCHRQSGQSDRAKYLPPFHTKLGQYSHTALLKRHPS 282
           R HR   ++DR K LPP   K+ Q + TA+ KR  S
Sbjct: 627 RLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQTS 662


>AE013599-3917|AAF47240.1|  673|Drosophila melanogaster CG4707-PA
           protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 389 RCHRQSGQSDRAKYLPPFHTKLGQYSHTALLKRHPS 282
           R HR   ++DR K LPP   K+ Q + TA+ KR  S
Sbjct: 627 RLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQTS 662


>AE014298-1398|AAN09623.1| 1100|Drosophila melanogaster CG2990-PB,
            isoform B protein.
          Length = 1100

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 18/74 (24%), Positives = 38/74 (51%)
 Frame = +3

Query: 426  KSLEAHELNDILARLKLKLVASQNRMWHVVNMSEQHTAGPITELIETLPEVIENNLKKGK 605
            +S EA  L D   RL + +  ++N++  + ++      GP  +L + +P+     L++G+
Sbjct: 1024 RSREAEILED-QRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPDRCRLKLEEGR 1082

Query: 606  HRFTRPEVQTNLIG 647
              F    +Q +L+G
Sbjct: 1083 MEFGWQRIQEDLVG 1096


>AE014298-1397|AAF46543.1| 1119|Drosophila melanogaster CG2990-PA,
            isoform A protein.
          Length = 1119

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 18/74 (24%), Positives = 38/74 (51%)
 Frame = +3

Query: 426  KSLEAHELNDILARLKLKLVASQNRMWHVVNMSEQHTAGPITELIETLPEVIENNLKKGK 605
            +S EA  L D   RL + +  ++N++  + ++      GP  +L + +P+     L++G+
Sbjct: 1043 RSREAEILED-QRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHIPDRCRLKLEEGR 1101

Query: 606  HRFTRPEVQTNLIG 647
              F    +Q +L+G
Sbjct: 1102 MEFGWQRIQEDLVG 1115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,538,083
Number of Sequences: 53049
Number of extensions: 521303
Number of successful extensions: 1654
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)