Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j17
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   2.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   3.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   4.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    20   9.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   9.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   9.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +1

Query: 274 LNHPIHPIRKIKNXXXXXXXXPHATEELQTRFLLKYILLYYFVIDT*C 417
           L+H   P    +         P   ++L  +FLL YI +   ++ + C
Sbjct: 334 LSHQSMPATGERQTLMFSATFPEEVQQLAGKFLLNYIFIAVGIVGSAC 381


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -3

Query: 282 MVEVSQVWRVSGKMLDLFHGAFRNFP*IWILHLKIIVPFVYLRT*NMTTKFIHFSSLLGK 103
           ++EV ++ R+ G+M+ LF+  F  +P ++I    +I   V L   N  T  +   +L  K
Sbjct: 215 VIEVRKLSRLLGEMVGLFNDIF-GWPLVFITGRFVIKILVAL---NFFTSTLEIDNLYLK 270

Query: 102 QK 97
            K
Sbjct: 271 HK 272


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 208 KISESAMKEIQHFAANPPDLTHLNHPIHPI 297
           ++ E  + E   F+ N P L H ++ + P+
Sbjct: 48  RVKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 384 IIILFCNRYMMSNKINDKFLKK 449
           ++ L C R   SN+IN+  LK+
Sbjct: 403 VLGLVCFRLKASNEINEALLKR 424


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 208 KISESAMKEIQHFAANPPDLTHLNHPIHPI 297
           ++ E  + E   F+ N P L H ++ + P+
Sbjct: 48  RVKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 MTTKFIHFSSLLGKQKCKSYR 82
           + T+ +H S+ + K K  SY+
Sbjct: 512 LNTEVLHLSNAINKMKAPSYQ 532


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 211 ISESAMKEIQHFAANPPDLTHLNHPIHPI 297
           + E  + E   F+ N P L H ++ + P+
Sbjct: 49  VKEEPIYESCRFSINQPYLNHFDNSVTPM 77


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 68  YDSTYLCIYLRVFGKVKIY 12
           Y  T+LC+YL +   + IY
Sbjct: 286 YTVTFLCLYLFLIITLTIY 304


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 439 NLSFILLDIMYRLQNNII 386
           NL F+L+   + + NNII
Sbjct: 106 NLIFLLIQTRFEMINNII 123


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 273 PQPSYTPYPKNQKLNWNIFHISSRNR 350
           P PS  P  K++KLN N   +SS N+
Sbjct: 75  PAPSELPALKSRKLNNNNV-VSSTNQ 99


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 271 HLNHPIHP 294
           HLNH +HP
Sbjct: 44  HLNHAMHP 51


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +1

Query: 142 HILCSKIHKWYNDFKVKY 195
           H L      W+N+ + KY
Sbjct: 91  HYLIDNKRDWWNELEAKY 108


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 113 KEEKCINFVVIFYV 154
           K  K  NF+++FY+
Sbjct: 317 KTNKYCNFIILFYL 330


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 181 FKVKYPDLWKISESA 225
           FK++Y DL K  ES+
Sbjct: 132 FKIRYKDLNKALESS 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,331
Number of Sequences: 336
Number of extensions: 2844
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)