Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j17
         (452 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M63256-1|AAA51961.1|  509|Homo sapiens major Yo paraneoplastic a...    29   7.4  
BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.        29   9.8  
BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.        29   9.8  
BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.        29   9.8  
BC004871-1|AAH04871.2|  237|Homo sapiens CLSTN2 protein protein.       29   9.8  
AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.       29   9.8  
AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.        29   9.8  

>M63256-1|AAA51961.1|  509|Homo sapiens major Yo paraneoplastic
           antigen protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 112 QRREMYKFRRHILCSKIHKWYNDFKVKYPDLWKISESAMKEIQHFAANPP 261
           +R +  K R   L  ++   Y+  KVKY +L K  +     + H A  PP
Sbjct: 389 RRAKAVKQRGISLLHEVDTQYSALKVKYEELLKKCQEEQDSLSHKAGRPP 438


>BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 766 RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 817


>BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 766 RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 817


>BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 766 RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 817


>BC004871-1|AAH04871.2|  237|Homo sapiens CLSTN2 protein protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 48  RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 99


>AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 766 RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 817


>AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.
          Length = 955

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +1

Query: 136 RRHILCSKIHKWY--NDFKVKYPDLWKISESAMKEIQHFAANPPDLTHLNHP 285
           R  I CS+++  Y  N+F ++   L +   S  + + H    PP L  ++HP
Sbjct: 766 RFRIKCSELNGRYTSNEFNLEVSILHEDQVSDKEHVNHLIVQPPFLQSVHHP 817


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,866,807
Number of Sequences: 237096
Number of extensions: 1379744
Number of successful extensions: 2803
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2803
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)