Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10j14
(732 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING ... 44 8e-05
At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING ... 44 8e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 40 0.002
At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger) fa... 38 0.007
At3g29270.2 68416.m03675 expressed protein 36 0.037
At3g29270.1 68416.m03674 expressed protein 36 0.037
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 36 0.037
At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger) fa... 35 0.048
At1g74370.1 68414.m08616 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 33 0.20
At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger) fa... 33 0.20
At5g13530.1 68418.m01562 protein kinase family protein / ankyrin... 33 0.20
At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger) fa... 33 0.26
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 33 0.26
At1g69330.1 68414.m07954 zinc finger (C3HC4-type RING finger) fa... 33 0.26
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 33 0.26
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 32 0.34
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 32 0.34
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 32 0.34
At2g44410.1 68415.m05523 expressed protein 32 0.45
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 31 0.60
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 31 0.60
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 31 0.79
At3g32270.1 68416.m04114 hypothetical protein similar to putativ... 31 0.79
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 31 1.0
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 31 1.0
At1g13220.1 68414.m01533 nuclear matrix constituent protein-rela... 31 1.0
At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger) fa... 30 1.4
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 30 1.4
At1g05890.1 68414.m00617 zinc finger protein-related contains lo... 30 1.4
At5g25560.1 68418.m03041 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At4g15545.1 68417.m02375 expressed protein 30 1.8
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger) fa... 30 1.8
At1g65430.1 68414.m07423 zinc finger protein-related contains we... 30 1.8
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 29 2.4
At4g14840.1 68417.m02281 expressed protein 29 2.4
At3g26240.1 68416.m03274 DC1 domain-containing protein contains ... 29 2.4
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 2.4
At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 29 3.2
At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At1g50660.1 68414.m05696 expressed protein similar to liver stag... 29 3.2
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 29 4.2
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 29 4.2
At3g26250.1 68416.m03275 DC1 domain-containing protein contains ... 29 4.2
At3g12190.1 68416.m01520 hypothetical protein 29 4.2
At2g31780.1 68415.m03880 zinc finger (C3HC4-type RING finger) fa... 29 4.2
At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing... 29 4.2
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 29 4.2
At5g64110.1 68418.m08051 peroxidase, putative similar to peroxid... 28 5.6
At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / he... 28 5.6
At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / he... 28 5.6
At4g27595.1 68417.m03964 protein transport protein-related low s... 28 5.6
At1g56145.1 68414.m06448 leucine-rich repeat family protein / pr... 28 5.6
At1g32550.1 68414.m04017 ferredoxin family protein similar to fe... 28 5.6
At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger) fa... 28 7.3
At5g53020.1 68418.m06585 expressed protein 28 7.3
At5g20200.1 68418.m02406 nucleoporin-related contains weak simil... 28 7.3
At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing ... 28 7.3
At4g16680.1 68417.m02519 RNA helicase, putative similar to SP|Q1... 28 7.3
At3g14620.1 68416.m01851 cytochrome P450, putative similar to GB... 28 7.3
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 28 7.3
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 28 7.3
At1g56130.1 68414.m06445 leucine-rich repeat family protein / pr... 28 7.3
At1g21810.1 68414.m02729 expressed protein 28 7.3
At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) fa... 27 9.7
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 27 9.7
At5g45420.1 68418.m05581 myb family transcription factor contain... 27 9.7
At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger) fa... 27 9.7
At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger) fa... 27 9.7
At4g13640.1 68417.m02122 myb family transcription factor contain... 27 9.7
At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger) fa... 27 9.7
At2g38430.1 68415.m04720 expressed protein 27 9.7
At1g56140.1 68414.m06446 leucine-rich repeat family protein / pr... 27 9.7
>At3g08505.2 68416.m00987 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains zinc finger
C-x8-C-x5-C-x3-H type (and similar) domains,
Pfam:PF00642 and zinc finger, C3HC4 type (RING finger)
domain, Pfam:PF00097
Length = 323
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +3
Query: 192 KQQRMMAELKKEPVINFKFECSVCFETY-SQQSNDTCPFLIPTTCDHGFCFKCVIDLQSN 368
K+Q+ + LK+ I ECSVC + S+ + F + T CDH FC +C+ + +S+
Sbjct: 154 KKQKHIEALKQSQDI----ECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSS 209
Query: 369 A----MNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYK 515
A M++ ++ CP+C R L V + +Y +E+ + YK
Sbjct: 210 APVSGMDVNSTLRACPIC-------RKLSYFVVPSVVWYSSPEEKKEIIDIYK 255
>At3g08505.1 68416.m00986 zinc finger (CCCH-type/C3HC4-type RING
finger) family protein contains zinc finger
C-x8-C-x5-C-x3-H type (and similar) domains,
Pfam:PF00642 and zinc finger, C3HC4 type (RING finger)
domain, Pfam:PF00097
Length = 323
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +3
Query: 192 KQQRMMAELKKEPVINFKFECSVCFETY-SQQSNDTCPFLIPTTCDHGFCFKCVIDLQSN 368
K+Q+ + LK+ I ECSVC + S+ + F + T CDH FC +C+ + +S+
Sbjct: 154 KKQKHIEALKQSQDI----ECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSS 209
Query: 369 A----MNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQERVPAVQQYK 515
A M++ ++ CP+C R L V + +Y +E+ + YK
Sbjct: 210 APVSGMDVNSTLRACPIC-------RKLSYFVVPSVVWYSSPEEKKEIIDIYK 255
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Frame = +3
Query: 315 TTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCKFYKKTQER- 491
T C H FC+ C+I N + CP C+ + L PN ++ K KKT R
Sbjct: 65 TACGHSFCYMCIITHLRNKSD-------CPCCSQHLTN-NQLYPNFLLD-KLLKKTSARH 115
Query: 492 -VPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSE 668
+ LQ +S++ DN + E + K+ EAE +N + D +
Sbjct: 116 VSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAE-RNMQILLDFLHCL 174
Query: 669 NRQLIEENTRLNEQVQELQ 725
+Q ++E LNE +LQ
Sbjct: 175 RKQKVDE---LNEVQTDLQ 190
>At2g39100.1 68415.m04804 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 296
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMW 431
C +C E +++ + + T C HG+C C+ S N CPLCNT+ W
Sbjct: 39 CPICLENLTERRSAA----VITVCKHGYCLACIRKWSSFKRN-------CPLCNTRFDSW 87
>At3g29270.2 68416.m03675 expressed protein
Length = 263
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP-HSI-----VCCPLC 410
EC +C+E+++ N P+++ C H C C++ LQ + +P H + + CP C
Sbjct: 53 ECPICWESFNIVEN--VPYVL--WCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWC 108
Query: 411 N 413
N
Sbjct: 109 N 109
>At3g29270.1 68416.m03674 expressed protein
Length = 263
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP-HSI-----VCCPLC 410
EC +C+E+++ N P+++ C H C C++ LQ + +P H + + CP C
Sbjct: 53 ECPICWESFNIVEN--VPYVL--WCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWC 108
Query: 411 N 413
N
Sbjct: 109 N 109
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 318 TCDHGFCFKCV---IDLQSNAMNIPHSIVCCPLCNTQ 419
TC H FCF C+ I + S+ + S V CPLC T+
Sbjct: 37 TCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCKTE 73
>At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 316
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPL--CNTQVK 425
C VC+E + F +P C H FCF C+ A+ +V CP CN++++
Sbjct: 157 CPVCYEHVTSDEK----FEVPG-CFHRFCFDCIKKQADVALEFAKPVVNCPSFGCNSELQ 211
Query: 426 MWRS---LKPNAVVTCKFYKK 479
LKP + YKK
Sbjct: 212 REDCEGVLKPKQLDRMTMYKK 232
>At1g74370.1 68414.m08616 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 261
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 243 KFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQS----NAMNIPHSI---VCC 401
K EC +C+E+++ N P+++ C H C C++ LQ + +P + V C
Sbjct: 43 KLECPICWESFNVVEN--VPYVL--WCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVAC 98
Query: 402 PLCN 413
P CN
Sbjct: 99 PWCN 102
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCV-IDLQSNAMNIPHSIVCCPLCNTQVK 425
ECSVC + + +IP C H F C+ + LQ+NA CPLC T+V
Sbjct: 137 ECSVCLSEFQDEEKLR---IIPN-CSHLFHIDCIDVWLQNNAN--------CPLCRTRVS 184
Query: 426 MWRSLKPNAV 455
S P+ V
Sbjct: 185 CDTSFPPDRV 194
>At5g37280.1 68418.m04478 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA1b [Arabidopsis thaliana] GI:3790567; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 216
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 198 QRMMAELKKEPVINFKFECSVCFETYSQQSNDTC--PFLIPTTCDHGFCFKCV 350
QR++ E EP ++ CS+CFE S ++T + C H F KC+
Sbjct: 141 QRLLEEQTVEPSMDSDESCSICFEKLSDSLSETYHNSIIQMPKCLHSFHQKCI 193
>At5g13530.1 68418.m01562 protein kinase family protein / ankyrin
repeat family protein contains similarity to
ankyrin-related gene UNC-44 gi|790608|gb|AAA85854;
contains Pfam domains PF00023: Ankyrin repeat and
PF00069: Protein kinase domain
Length = 834
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLC 410
CSVC Y++ ++ P L+ C HGFC C+ + S + + + + CP C
Sbjct: 10 CSVCHTRYNE--DERVPLLLQ--CGHGFCKDCLSKMFSTSSD---TTLTCPRC 55
>At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 243
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCV---IDLQSNAMNIPHSIVCCPLCNT 416
F+C++C +T ++D + T C H FC+ C+ + +Q +++++ CP+C +
Sbjct: 42 FDCNICLDT----AHDP----VVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93
Query: 417 QVKMWRSLKP 446
+ + SL P
Sbjct: 94 NITI-TSLVP 102
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVC---CPLC 410
+C +C E CP + T+C H FCF C++ ++ H + C CPLC
Sbjct: 244 QCPICLEY------PLCPQI--TSCGHIFCFPCILQYLLTGVD-NHKVDCFKRCPLC 291
>At1g69330.1 68414.m07954 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 270
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHS------IVCCPLC 410
EC +C+E+++ N P+++ C H C CV LQS + + V CP C
Sbjct: 44 ECPICWESFNIVEN--VPYVL--WCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWC 99
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 243 KFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
K C++C ++ + C H F F C+ N+ H CPLC TQ
Sbjct: 66 KGRCAICLYEIRKEDGKA---IFTAECSHSFHFDCITS------NVKHGNRICPLCRTQW 116
Query: 423 K 425
K
Sbjct: 117 K 117
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 201 RMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLI-PTTCDHGFCFKCVIDLQSNAMN 377
R +A + K+ V++ + C +C E + ND ++ + C+H F C+ + +
Sbjct: 75 REIAAMIKDIVVDVELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQD 134
Query: 378 IPHSIVCCPLCNTQV 422
CP+C + V
Sbjct: 135 -------CPICRSTV 142
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 228 PVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPL 407
PV KF C +C ++Q+ + T C H FC KC+ NA+++ CP
Sbjct: 119 PVEEPKFSCPICLCPFTQE--------VSTKCGHIFCKKCI----KNALSLQAK---CPT 163
Query: 408 CNTQV 422
C ++
Sbjct: 164 CRKKI 168
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/96 (25%), Positives = 39/96 (40%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKMW 431
C +C+ +S ++P C H FC+ C I ++ + CPLC +
Sbjct: 300 CIICWTEFSSSRG-----ILP--CGHRFCYSC-IQKWADRLVSERKKTTCPLCKSNFITI 351
Query: 432 RSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQE 539
++ K Y +T VP + NI+ VL E
Sbjct: 352 TKIEDADSSDQKIYSQT---VPDLSSTNNILVVLPE 384
>At2g44410.1 68415.m05523 expressed protein
Length = 413
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
F+C++C E ++ D P L T C H FC+ C L +NI CP+C+ +V
Sbjct: 123 FDCNICLE----KAED--PIL--TCCGHLFCWGCFYQLPLIYLNIKE----CPVCDGEV 169
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 507 QYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEA---ELKNEK--NHSDQVTSEN 671
+ +N +K +E +V+ +ENS+ E + K+ LEA ELK+E N V
Sbjct: 368 ELENEVKCNREEAVVHIENSEVLTSRTKELEEKLEKLEAEKEELKSEVKCNREKAVVHVE 427
Query: 672 RQLIEENTRLNEQVQELQRQ 731
L E L + +EL+ Q
Sbjct: 428 NSLAAEIEVLTSRTKELEEQ 447
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 507 QYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEA---ELKNEK--NHSDQVTSEN 671
+ +N +K +E +V+ +ENS+ E + K+ LEA ELK+E N V
Sbjct: 334 ELENEVKCNREEAVVHIENSEVLTSRTKELEEKLEKLEAEKEELKSEVKCNREKAVVHVE 393
Query: 672 RQLIEENTRLNEQVQELQRQ 731
L E L + +EL+ Q
Sbjct: 394 NSLAAEIEVLTSRTKELEEQ 413
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 321 CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
C H FCF+C ID S MN+ CPLC + ++
Sbjct: 47 CQHWFCFEC-IDNWSTIMNL------CPLCQREFQL 75
>At3g32270.1 68416.m04114 hypothetical protein similar to putative
replication protein A1 GB:AAC95163 GI:4006821 from
[Arabidopsis thaliana]
Length = 209
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 356 IDDAFETKTVVARSRNQKRT-SIVRLLRICFETHTALKFKIN 234
IDD +T ++ N +RT ++V LRICF+ LK KIN
Sbjct: 124 IDDEIDTSVLIGEVENTRRTQNVVNDLRICFK----LKNKIN 161
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 30.7 bits (66), Expect = 1.0
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +3
Query: 300 PFLIPTTCDHGFCFKCVIDLQSNAMNIPH---SIVCCPLCNTQVKMW--RSLKPNAVVTC 464
PFL PTT C+K +D++ + H S V C T + +W R L+
Sbjct: 207 PFLPPTTPSCRVCYK-TVDIKYGQYSCDHEGCSYVAHSKCATHMHVWDGRELEWEP---- 261
Query: 465 KFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEA 623
+ +T++ VP + N+IK + +E D+ D + QA I+ +++
Sbjct: 262 EELDETEDIVPFKKVGDNMIKYFCHEHHLKLEKYDSVRDAKKQCQACILRIDS 314
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
KI LE EL +++ + EN++L+ ++ +LN+ QE Q
Sbjct: 88 KISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQ 128
>At1g13220.1 68414.m01533 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 391
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 603 KIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
KI LE EL +++ + EN++L+ ++ +LN+ QE Q
Sbjct: 101 KISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQ 141
>At4g15975.1 68417.m02425 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 235
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 240 FKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQ 419
F ECSVC + + + C H F C ID+ HS CPLC +Q
Sbjct: 72 FAMECSVCLSEFKDNESGR----VMPNCKHTFHVHC-IDMWF------HSHSSCPLCRSQ 120
Query: 420 VK 425
++
Sbjct: 121 IE 122
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 243 KFECSVCFETYSQQSNDTCPFLIPTT-CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQ 419
K CS+C + + C I T C H F F C+ A N+ H CP+C +
Sbjct: 72 KQTCSICLN----KMKEGCGHAIFTAECSHMFHFHCI------ASNVKHGNQVCPVCRAK 121
Query: 420 VKMWRSLKPN 449
K KP+
Sbjct: 122 WKEIPIQKPS 131
>At1g05890.1 68414.m00617 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 552
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 243 KFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMN 377
+F C +CF++Y+ + ++ +C H FC C S +N
Sbjct: 129 EFTCGICFDSYTLEE------IVSVSCGHPFCATCWTGYISTTIN 167
>At5g25560.1 68418.m03041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 308
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV-- 422
+C +CFE + ND ++P C H KC+ +++ H CPLC+ V
Sbjct: 198 DCPICFEFLFESRNDVT--VLP--CGHTIHQKCLEEMRD------HYQYACPLCSKSVCD 247
Query: 423 --KMWRSLKPNAVVT 461
K+W T
Sbjct: 248 MSKVWEKFDMEIAAT 262
>At4g15545.1 68417.m02375 expressed protein
Length = 337
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 591 ENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLNEQVQELQR 728
E Q+ + +LEA L + + E LI EN L+ V+ LQR
Sbjct: 78 ELQSHVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQR 123
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 192 KQQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCV---IDLQ 362
K + + + + + F+C++C ++ + + T C H FC+ C+ +D+Q
Sbjct: 28 KPEPITVSVPSDDTDDSNFDCNICLDSVQEP--------VVTLCGHLFCWPCIHKWLDVQ 79
Query: 363 SNAMNIPHS-IVCCPLCNTQV 422
S + + + CP+C ++V
Sbjct: 80 SFSTSDEYQRHRQCPVCKSKV 100
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 192 KQQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCV---IDLQ 362
K + + + + + F+C++C ++ + + T C H FC+ C+ +D+Q
Sbjct: 28 KPEPITVSVPSDDTDDSNFDCNICLDSVQEP--------VVTLCGHLFCWPCIHKWLDVQ 79
Query: 363 SNAMNIPHS-IVCCPLCNTQV 422
S + + + CP+C ++V
Sbjct: 80 SFSTSDEYQRHRQCPVCKSKV 100
>At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTT-CDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
CS+C + + C I T C H F F C+ A N+ H CP+C + K
Sbjct: 74 CSICLN----KMKEGCGHAIFTAECSHMFHFHCI------ASNVKHGNQVCPVCRAKWKE 123
Query: 429 WRSLKPN 449
KP+
Sbjct: 124 IPIQKPS 130
>At1g65430.1 68414.m07423 zinc finger protein-related contains weak
similarity to zinc finger proteins and a Pfam:PF01485
IBR domain
Length = 567
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 216 LKKEPVINF----KFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMN 377
L ++PV++F + +C +CFET+ L C H FC C + A+N
Sbjct: 112 LLEKPVVDFPTDGELDCGICFETFLSDK------LHAAACGHPFCDSCWEGYITTAIN 163
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = +3
Query: 513 KNIIKVLQERSVISVENSDNNCDINMEN--QAKIVAL---EAELKNEKNHSDQVTSENRQ 677
+++IK+ ER +S+ N + N + ++V L +AEL + H V S +
Sbjct: 493 RSVIKLEMER--LSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQS 550
Query: 678 LIEENTRLNEQVQELQRQ 731
+ EE R+N ++Q+ +R+
Sbjct: 551 IKEEIDRVNLEIQQAERE 568
>At4g14840.1 68417.m02281 expressed protein
Length = 555
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +3
Query: 489 RVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSE 668
R+ +++ +V QE + VE +D N+AK+ +L+ E + K+ + +E
Sbjct: 404 RLKLIEEIPTFSEVFQENQSMIVE-ADRFFSALELNKAKVASLKYEYSDLKDKLGNIQTE 462
Query: 669 NRQLIEENTRLNEQVQELQ 725
+ E +++EQ+ +LQ
Sbjct: 463 VDRNSETIRQIDEQIAQLQ 481
>At3g26240.1 68416.m03274 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 922
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 237 NFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKC 347
N + CSVC + + + +T I CD+ CFKC
Sbjct: 739 NEERNCSVCAKAPGEYTKETFN-CIEEECDYALCFKC 774
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 YKNIIKVLQERSVISVENSDNNCDIN-MENQAKIVALEAELKNEKNHSDQVTSENRQLIE 686
YK LQE+ I E S + D+ +ENQ + +LEAELK + + ++L
Sbjct: 511 YKLEQSQLQEQLKIQYECSSSLVDVTELENQVE--SLEAELKKQSEEFSESLCRIKELES 568
Query: 687 ENTRLNEQVQE 719
+ L E++++
Sbjct: 569 QMETLEEEMEK 579
>At5g41350.1 68418.m05025 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 212
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQV 422
+C +C E Y ++ P L+ CDH F C+++ + CP+CN ++
Sbjct: 160 DCPICLEEYDIEN----PKLV-AKCDHHFHLACILEWMERSET-------CPVCNKEM 205
>At4g14220.1 68417.m02194 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 371
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP 383
CS+C E ++ Q T T+C H + +C+I+ + P
Sbjct: 46 CSICLEPFTLQDPSTV-----TSCKHEYHLQCIIEWSQRSKECP 84
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 201 RMMAELKKEPVINFK-----FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKC 347
R + KEPV++ +C +CFE+Y+++ + +C H +C C
Sbjct: 99 RKTVGILKEPVVDVNGTEVDIQCGICFESYTRKE------IASVSCGHPYCKTC 146
>At2g18670.1 68415.m02175 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 240 FKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQ 419
++ +C VCF+ + Q C L C H F KCV A CP+C +
Sbjct: 106 YESDCVVCFDGFRQ--GQWCRNL--PGCGHVFHRKCVDTWLLKAST-------CPICRAR 154
Query: 420 VKMW 431
V++W
Sbjct: 155 VRLW 158
>At1g50660.1 68414.m05696 expressed protein similar to liver stage
antigen-1 (GI:510184) [Plasmodium falciparum]; similar
to Myosin II heavy chain, non muscle (Swiss-Prot:P08799)
[Dictyostelium discoideum]; similar to liver stage
antigen (GI:9916) [Plasmodium falciparum]; similar to
Kinesin-like protein KLPA (Swiss-Prot:P28739)
[Emericella nidulans]
Length = 725
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 555 VENSDNNCDINMENQAKIVALEAELKNEK-NHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
+E S I+ +++ V+L+A + N+K HSD T +N IEE+ E V L+ Q
Sbjct: 484 MEKSVAYSPISHDSKVHTVSLDANMMNKKGRHSDAYTHQNGD-IEEDDSGWETVSHLEEQ 542
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVKM 428
EC++C + Q + + C HGF KC+ S + CP C T +
Sbjct: 106 ECAICLSEFEQGES----IQVLEKCQHGFHVKCIHKWLSTRSS-------CPTCRTSIFS 154
Query: 429 WRSLKPNA 452
S P++
Sbjct: 155 QHSETPSS 162
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 471 YKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKI----VALEAELKNE 638
YK+ QE ++QQY + ++ E ++ ++ +EN + + +L+ +L +
Sbjct: 222 YKRLQEYNTSLQQYNSKLQTDLETVRAALTRAEKEKSSILENLSTLRGHSKSLQDQLSSS 281
Query: 639 KNHSDQVTSENRQLIEENTRLNEQVQELQ 725
+ D + L+ E T L ++Q+++
Sbjct: 282 RVLQDDAIKQKDSLLSEVTNLRNELQQVR 310
>At3g26250.1 68416.m03275 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 490
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKC 347
CSVC E + +T I CD CFKC
Sbjct: 310 CSVCAEARGYYTKETFN-CIEEECDFALCFKC 340
>At3g12190.1 68416.m01520 hypothetical protein
Length = 269
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 525 KVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRLN 704
K+L++R+ + +D E Q K+ L+ E+++E+ V NR+ E R
Sbjct: 77 KILEKRAR-EINTADGFRRDFEEKQRKLDRLKREIESEEKKRFLVQKLNRERKFELKRTR 135
Query: 705 EQVQELQR 728
EQV+ LQ+
Sbjct: 136 EQVEALQK 143
>At2g31780.1 68415.m03880 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam:PF01485 IBR
domain
Length = 537
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 201 RMMAELKKEPVINFK-----FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKC 347
R + KEPV++ +C +CFE+Y+++ + +C H +C C
Sbjct: 117 RKTVGILKEPVVDVNGTEVDIQCGICFESYTRKE------IARVSCGHPYCKTC 164
>At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427, gpStaf50
[Homo sapiens] GI:899300; contains Pfam profiles
PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 335
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Frame = +3
Query: 204 MMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQS----NA 371
+ EL ++ CS+C +T I TC H +C+ C S +
Sbjct: 215 LSCELSDSVKVDIDLTCSICLDTVFDP--------ISLTCGHIYCYMCACSAASVNVVDG 266
Query: 372 MNIPHSIVCCPLC 410
+ + CPLC
Sbjct: 267 LKTAEATEKCPLC 279
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Frame = +3
Query: 402 PLCNTQVKMWRSLKPNAVVTCKFYKKTQERVP------AVQQYKNIIKVLQERSVISVEN 563
PL N K R P++ C+ +K++ ERVP A++ + N++ V+ + V+
Sbjct: 507 PLSNGDPKKQR---PDSFALCEEWKQSLERVPDTVASEAIKSFVNVVHVISIKQAEEVKM 563
Query: 564 SDNNCDINMENQAKIVALEA-ELKNEKNHSDQVTSENRQLIEENTRLNEQVQEL 722
E + K +L + E K + +S ++++ L+E+ EL
Sbjct: 564 KKRTESAGKELEKKASSLRSIERKYYQAYSTVGIGPGPEVLDSRDPLSEKKCEL 617
>At5g64110.1 68418.m08051 peroxidase, putative similar to peroxidase
ATP3a [Arabidopsis thaliana] gi|1546698|emb|CAA67340
Length = 330
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 394 TIECGIFIALLCRSMTHLKQKPWSHV-VGIKKGQVSL 287
T+ C +AL R HL PW V +G G++SL
Sbjct: 122 TVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISL 158
>At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 504 QQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSE-NRQL 680
Q + K +Q ++ NN D N + + ++N D V + NRQ+
Sbjct: 195 QMMSFLAKAVQSPGFLNQLVQQNNNDGNRQIPGSNKKRRLPVDEQENRGDNVANGLNRQI 254
Query: 681 IEENTRLNEQVQELQRQ 731
+ +NE Q + RQ
Sbjct: 255 VRYQPSINEAAQNMLRQ 271
>At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 504 QQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSE-NRQL 680
Q + K +Q ++ NN D N + + ++N D V + NRQ+
Sbjct: 195 QMMSFLAKAVQSPGFLNQLVQQNNNDGNRQIPGSNKKRRLPVDEQENRGDNVANGLNRQI 254
Query: 681 IEENTRLNEQVQELQRQ 731
+ +NE Q + RQ
Sbjct: 255 VRYQPSINEAAQNMLRQ 271
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 522 IKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQLIEENTRL 701
+K ++E S ++ D + Q V E E +N K ++++ N +L+E+ +L
Sbjct: 719 LKKIEELSAVNERLVDKETKLQSSIQEVEVLKEREAENIKQ-IEELSLSNERLVEKEAKL 777
Query: 702 NEQVQE 719
VQE
Sbjct: 778 QTVVQE 783
>At1g56145.1 68414.m06448 leucine-rich repeat family protein / protein
kinase family protein contains Pfam profiles: PF00069:
Eukaryotic protein kinase domain, multiple PF00560:
Leucine Rich Repeat
Length = 1012
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -3
Query: 379 IFIALLCRSMTHLKQKPWSHVVGIKKGQVSLDC*E----YVSKHTLHSNLKLITGSFFNS 212
I +A LC H + S VVG+ G V + YVS+ T + + ++GS +S
Sbjct: 931 IGVAFLCTQTDHAIRPTMSRVVGMLTGDVEITEANAKPGYVSERTFENAMSFMSGSTSSS 990
Query: 211 AII 203
I+
Sbjct: 991 WIL 993
>At1g32550.1 68414.m04017 ferredoxin family protein similar to
ferredoxin from Synechocystis sp. [GI:48019]; contains
Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding
domain
Length = 181
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 249 ECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSI 392
E V + Y S ++ +P C HG C C + ++S + P ++
Sbjct: 73 EFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSGELRQPQAL 120
>At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 508
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Frame = +3
Query: 321 CDHGFCFKCVIDL------QSNAMNIPHSIVCCPLCNTQVKMWRSLKPNAVVTCK 467
C H FC C + L S N+ V CPLC + + L P+ T +
Sbjct: 336 CAHEFCTNCALYLSTTSITSSKTSNVTPGSVPCPLCRNGIVSFTKL-PHTTATTR 389
>At5g53020.1 68418.m06585 expressed protein
Length = 721
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = +3
Query: 498 AVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAELKNEKNHSDQVTSENRQ 677
A+++ K ++L+ER V + + D+ + + +EL +K ++ S RQ
Sbjct: 121 AIEEEKRKCELLEERLVKAEKEVQ---DLRETQERDVQEHSSELWRQKKTFLELASSQRQ 177
Query: 678 LIEENTRLNEQVQ 716
L E +R N+Q++
Sbjct: 178 LEAELSRANKQIE 190
>At5g20200.1 68418.m02406 nucleoporin-related contains weak
similarity to Nucleoporin NUP1 (Nuclear pore protein
NUP1) (Swiss-Prot:P20676) [Saccharomyces cerevisiae]
Length = 762
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 60 RRHRSTPYERPTLEDLHRQ 116
RRH +TPY RPT + R+
Sbjct: 34 RRHAATPYSRPTQNQVQRR 52
>At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing
protein prolamin box binding factor, Zea mays,
PID:g2393775
Length = 194
Score = 27.9 bits (59), Expect = 7.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 588 YLCHNCCRCFRH 553
Y C NCCRC+ H
Sbjct: 46 YKCKNCCRCWTH 57
>At4g16680.1 68417.m02519 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 883
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +3
Query: 447 NAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQAKIVALEAE 626
N+ + +KT R+P ++ K+ +R ISVE + D EN+ K+ + E
Sbjct: 18 NSTIQFLSVEKTTCRLPVSIKFNIPKKISTKRRRISVEEEEEEED---ENKTKLSSWEKV 74
Query: 627 LKNEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
L +++ + S + L + R N++V+EL+
Sbjct: 75 LSSDEILRLREVSRRKYLTD---RENKKVEELR 104
>At3g14620.1 68416.m01851 cytochrome P450, putative similar to
GB:Q05047 from [Catharanthus roseus]
Length = 515
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 167 LTLPSTHLIAPLQSVFQLSVEIFKRRTFIWRRPVAAAIVGVPWH 36
LT TH + PL Q +V+ + +++W P+A+ IV P H
Sbjct: 77 LTDDYTHRVMPL---IQQTVKDHGKTSYMWMGPIASVIVTKPEH 117
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 27.9 bits (59), Expect = 7.3
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Frame = +3
Query: 204 MMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP 383
M+A++K+E V+ C +C + + + C H FC KC+ + +
Sbjct: 5 MVAKVKRETVVAC-MTCPLCDKLLRDATTIS-------ECLHTFCRKCIYEKITE----- 51
Query: 384 HSIVCCPLCNTQV--KMWRSLKPNAV---VTCKFY--KKTQERVPAVQQYKNIIKVLQER 542
I CP+C+ + L+P+ + + K + K+ +ER P V ++ +ER
Sbjct: 52 DEIESCPVCDIDLGGTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKER 111
Query: 543 SVISV 557
S+ S+
Sbjct: 112 SISSL 116
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVCCPLCNTQVK 425
FEC++CFE I T C H FC+ C L + HS CP+C V+
Sbjct: 26 FECNICFELAQDP--------IVTLCGHLFCWPC---LYRWLHHHSHSQE-CPVCKAVVQ 73
>At1g56130.1 68414.m06445 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1032
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 379 IFIALLCRSMTHLKQKPWSHVVGIKKGQVSL 287
I IALLC +H + P S VV + G V +
Sbjct: 938 IGIALLCTQTSHALRPPMSRVVAMLSGDVEI 968
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 630 KNEKNHSDQVTSENRQLIEENTRLNEQVQELQRQ 731
+ EKN VT ++L NT L ++V ELQ++
Sbjct: 81 EQEKNIQAAVTESTKELHSANTGLEKRVLELQKE 114
>At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 717
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 252 CSVCFETY-SQQSNDTCPFLIPTTCDHGFCFKCVIDLQ 362
C++C + S QSN T + C H F CV L+
Sbjct: 140 CAICLQRVNSNQSNSTAA-IFTAECSHSFHLSCVNGLE 176
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 112 LWRSSSVGRSYGVDRWRRRLLVSLGILLI-GRLSATN 5
L + SV R+ VD+W+R+ V+ G I G+L A N
Sbjct: 253 LQKRMSVFRNKAVDKWQRKTQVTTGAAAIKGKLHAFN 289
>At5g45420.1 68418.m05581 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 309
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 296 LSFFDSDYVRPRFLFQMRHRSAKQRDE 376
+ FFD D RPRF+FQ R S+ +E
Sbjct: 1 MDFFDED--RPRFVFQSRPSSSHTAEE 25
>At5g37270.1 68418.m04477 zinc finger (C3HC4-type RING finger)
family protein ow similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA1a [gi:3790554]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 208
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP 383
CS+C E +S+ +D L+P C H F C+ + + P
Sbjct: 153 CSICLEDFSESHDDNI-ILLP-DCFHLFHQSCIFEWLKRQRSCP 194
>At5g37250.1 68418.m04475 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA3b [gi:3790575], RHA3a [gi:3790573]; contains Pfam
domain zinc finger, C3HC4 type (RING finger) PF00097
Length = 192
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 252 CSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIP 383
CS+C E +S+ +D L+P C H F C+ + + P
Sbjct: 137 CSICLEDFSESHDDNI-ILLP-DCFHLFHQNCIFEWLKRQRSCP 178
>At4g13640.1 68417.m02122 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 292
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 552 SVENS-DNNCDINMENQAKIVALEAELK-NEKNHSDQVTSENRQLIEENTRLNEQVQELQ 725
S++NS D +C ++ L E+N S QVT R +E RL+EQ+ E+Q
Sbjct: 99 SIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQL-EVQ 157
Query: 726 RQ 731
R+
Sbjct: 158 RR 159
>At2g47560.1 68415.m05935 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 227
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +3
Query: 219 KKEPVINFKFECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVIDLQSNAMNIPHSIVC 398
K P K ECSVC + ++ L+P C H F C ID + +
Sbjct: 97 KNPPPPEEKEECSVCLSEFEEEDEGR---LLP-KCGHSFHVDC-IDTWFRSRS------T 145
Query: 399 CPLCNTQVK 425
CPLC V+
Sbjct: 146 CPLCRAPVQ 154
>At2g38430.1 68415.m04720 expressed protein
Length = 393
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 420 VKMWRSLKPNAVVTCKFYKKTQERVPAVQQYKNIIKVLQERSVISVENSDNNCDINMENQ 599
VK+ +PNA + CK +K R+ + N ++ L V+ V D N D+ +
Sbjct: 208 VKVSHYSRPNATINCKCTRKEDGRLSMYKVDLNPVRHL----VVDVSCIDKNLDMRLTLT 263
Query: 600 AK 605
AK
Sbjct: 264 AK 265
>At1g56140.1 68414.m06446 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1032
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 379 IFIALLCRSMTHLKQKPWSHVVGIKKGQVSL 287
I IALLC +H + P S VV + G V +
Sbjct: 936 IGIALLCTQTSHALRPPMSRVVAMLSGDVEV 966
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,475,581
Number of Sequences: 28952
Number of extensions: 316695
Number of successful extensions: 1312
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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