Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10j11
(752 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 28 0.092
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.49
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.86
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.86
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 1.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 2.0
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.0
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 23 2.0
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 23 2.0
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 22 4.6
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 22 4.6
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 27.9 bits (59), Expect = 0.092
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 587 SEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAI 724
+E F + F+ V FE+R N ++ +L S EKL+T +
Sbjct: 464 AESFDDMKDKFRRWVSAMSRPFEVRFNPHTGRVEVLDSVEKLETLV 509
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 25.4 bits (53), Expect = 0.49
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 203 VKWDSFKCNTHSFK-YRYVHNDTNAKFYNVIDFCKGLEI 316
V WD + NTH +K ++V D+ N +++ K L +
Sbjct: 313 VVWDDTQKNTHMYKGDQWVAFDSPKAISNKVEYAKSLNL 351
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.86
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 595 FFAVC--IQFFYMF*NRFNFVAQIIT 524
FFA+ IQFF M +RF +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.86
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 595 FFAVC--IQFFYMF*NRFNFVAQIIT 524
FFA+ IQFF M +RF +QIIT
Sbjct: 1290 FFALLMVIQFFAMMIHRFGTFSQIIT 1315
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 276 FAFVSLCTYLYLKLCVLHLNESHLTMC 196
+AF+ +L L +C+ + HL C
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFC 269
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 399 PNAISTRWAHC 431
PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 399 PNAISTRWAHC 431
PNA +T W+HC
Sbjct: 142 PNATNTVWSHC 152
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 361 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 227
N+I + + + YVV K VEF +++V S L+T+ +
Sbjct: 353 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 397
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 361 NLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVVHVSVLETVRV 227
N+I + + + YVV K VEF +++V S L+T+ +
Sbjct: 78 NIIILGLNVVYVVTAWICAITKRDMFVEFLLKLVDFDSKLQTMNI 122
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 518 GERD--DLRDKIESVLKHVKKLNTNSEKFMVTHETFK 622
G +D D +DK+ V +K+ MVT++ K
Sbjct: 470 GRKDEADYKDKLHKVAPRIKERMMKEGSMMVTYQAQK 506
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +2
Query: 653 ELRLNELDAKLNM---LQSAEKLKTAIVTESKNGTV 751
++ N LD L+ + AEKLK I KNG V
Sbjct: 36 QMTRNYLDCVLDKGKCTKEAEKLKKGITETMKNGCV 71
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,355
Number of Sequences: 336
Number of extensions: 3140
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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