Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10j11
(752 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 29 0.15
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 25 1.9
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.5
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 2.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 4.4
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 4.4
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 5.8
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 23 7.7
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 7.7
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 7.7
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 7.7
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 7.7
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 29.1 bits (62), Expect = 0.15
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 302 CKNLLHCRILRSCRCARICT*NCAC 228
C L HC +C C C NCAC
Sbjct: 776 CFALCHCCEFDACDCEMTCPNNCAC 800
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -1
Query: 368 NGKLDRCPNCNQVCRRAQFQDLCKNLLHCRILRSCRCAR 252
N L C CNQ+ ++C+ +C C+C R
Sbjct: 213 NEALQACGTCNQITCSGISTEVCRRSCYC----GCQCRR 247
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 421 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVV 257
++V ++ L+ + F +V I P ++ ++ + FA I + CV VVV
Sbjct: 273 EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 327
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 421 QRVEIAFGFLLVKNNFV*MVNLIAVPIAIKYVVVRNFKTFAKIYYIVEFCVRVVV 257
++V ++ L+ + F +V I P ++ ++ + FA I + CV VVV
Sbjct: 273 EKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 327
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.2 bits (50), Expect = 4.4
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 515 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 694
E E+++ + E ++ H+K E+ DVG E+ +ELD L
Sbjct: 435 ESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQL 494
Query: 695 QSAE 706
A+
Sbjct: 495 GDAK 498
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 302 CKNLLHCRILRSCRCARICT*NCAC 228
C L HC +C C C C C
Sbjct: 740 CFALCHCCDFYACDCKMECPKQCTC 764
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.8 bits (49), Expect = 5.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 702 ADCSMLSLASSSFKRNSNCSNLLPTS 625
+ CS LS ASS+ +S +L PTS
Sbjct: 236 SSCSPLSTASSASCSSSAAGSLCPTS 261
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 23.4 bits (48), Expect = 7.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 399 PNAISTRWAHC 431
PNA +T W+HC
Sbjct: 185 PNATNTVWSHC 195
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 23.4 bits (48), Expect = 7.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 399 PNAISTRWAHC 431
PNA +T W+HC
Sbjct: 185 PNATNTVWSHC 195
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +2
Query: 218 FKCNTHSFKYRYVHNDTNAKFYNVIDFCKG 307
F CN + F RY N Y KG
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +2
Query: 218 FKCNTHSFKYRYVHNDTNAKFYNVIDFCKG 307
F CN + F RY N Y KG
Sbjct: 560 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 589
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +2
Query: 218 FKCNTHSFKYRYVHNDTNAKFYNVIDFCKG 307
F CN + F RY N Y KG
Sbjct: 446 FTCNVNEFAQRYAEEGNNVYMYLYTHRSKG 475
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,064
Number of Sequences: 2352
Number of extensions: 13672
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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