Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j10
         (346 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei...    71   5e-12
UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17; ...    45   3e-04
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25...    35   0.43 
UniRef50_Q4QDG9 Cluster: Putative uncharacterized protein; n=3; ...    32   3.0  
UniRef50_A5BX36 Cluster: Putative uncharacterized protein; n=1; ...    30   9.2  
UniRef50_Q5KG43 Cluster: Expressed protein; n=2; Filobasidiella ...    30   9.2  

>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
           E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
           virus envelope protein E25 - Orgyia pseudotsugata
           multicapsid polyhedrosis virus (OpMNPV)
          Length = 229

 Score = 70.9 bits (166), Expect = 5e-12
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +1

Query: 4   LRKSNCTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYREM 138
           L  S CTLVYT+N AAQQ+LLEN FT +NA+ TA+LKN+KSYRE+
Sbjct: 185 LPPSACTLVYTRNSAAQQLLLENGFTVVNAEHTAFLKNHKSYREL 229


>UniRef50_Q83950 Cluster: ATP-dependent DNA helicase P143; n=17;
            Nucleopolyhedrovirus|Rep: ATP-dependent DNA helicase P143
            - Orgyia pseudotsugata multicapsid polyhedrosis virus
            (OpMNPV)
          Length = 1223

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 32/52 (61%)
 Frame = -2

Query: 336  SSKSFVFNEQVLLQQIXXXXXXXXXXXXXXXXNMTMALNRNDLNTSVPNFVC 181
            +++SFVF+E++LLQQI                N+TMALN+ D+N +VP F C
Sbjct: 1172 TARSFVFDEKILLQQIKDKFKNNYDERGCKFNNLTMALNKLDININVPQFKC 1223


>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
           Adoxophyes orana granulovirus (AoGV)
          Length = 217

 Score = 34.7 bits (76), Expect = 0.43
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = +1

Query: 19  CTLVYTKNEAAQQVLLENNFTAINADQTAYLKNYKSYR 132
           C LV   N +AQ VL E  +T IN   T Y+KN KS+R
Sbjct: 180 CVLV--NNSSAQLVLKEWGYTQINDSGTLYVKNEKSFR 215


>UniRef50_Q4QDG9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 569

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = +3

Query: 123 IIQRNELIKQKKSIYILFINIQNLVH*CSNRFCSTPLS 236
           +++++EL KQ+  +Y+ ++  + +V  C+ RF +TP S
Sbjct: 530 LMEQHELEKQRHHMYLHYVPAKTIVCKCTGRFAATPQS 567


>UniRef50_A5BX36 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 269

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +2

Query: 122 NHTEK*INKTKKVYLYIIY*HTKFGTLVFKSFLFNAI 232
           N T++ + + K++YL+ +Y  T  GTL+ K   +N +
Sbjct: 225 NKTKELVTRLKEIYLFSLYAWTGIGTLIRKHAFWNTL 261


>UniRef50_Q5KG43 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 331

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 38  KTRQLSKFYWKITLPLLMLTKPPISKTI 121
           KT  LSK+Y++ T+P+L  T P  SK++
Sbjct: 37  KTLTLSKYYYRHTIPILYRTVPISSKSL 64


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,381,508
Number of Sequences: 1657284
Number of extensions: 4061251
Number of successful extensions: 8769
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8766
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)