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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j10
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    25   0.22 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   0.22 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.2  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 YTSVQIVSVQRHCHVIKHIC 255
           YTS Q+V ++R  H  K++C
Sbjct: 92  YTSSQLVELEREFHRSKYLC 111


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 YTSVQIVSVQRHCHVIKHIC 255
           YTS Q+V ++R  H  K++C
Sbjct: 112 YTSSQLVELEREFHRSKYLC 131


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 YTSVQIVSVQRHCHVIKHIC 255
           YT+ Q++ +++  H  K++C
Sbjct: 11  YTNTQLLELEKEFHFNKYLC 30


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 196 YTSVQIVSVQRHCHVIKHIC 255
           YT+ Q++ +++  H  K++C
Sbjct: 142 YTNTQLLELEKEFHFNKYLC 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,325
Number of Sequences: 336
Number of extensions: 1279
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)

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