Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j06
         (251 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   2.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   4.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   6.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    19   8.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   8.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 186 SEGLQQFLLLGGNTFLAALACL 121
           SE ++QFL     TF+A LA L
Sbjct: 461 SEMVKQFLFTQKFTFVAGLATL 482


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 80  IFVLAFSAFFLWMYSMSTRLF 18
           + +L F A+ LW+ S+  R+F
Sbjct: 125 VLLLLFDAY-LWISSVGVRMF 144


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -2

Query: 166 PPSWRQYVPRGACVPPL-LYCGGPQ 95
           PP++   +P+G  + PL   C  P+
Sbjct: 440 PPTYDYGIPQGVVLNPLDAICNKPR 464


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 FLAALACLLYFIAAGLSLVAK 82
           F++   CLL+F++    L+ K
Sbjct: 301 FVSVWKCLLFFVSVLFILLVK 321


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 FLAALACLLYFIAAGLSLVAK 82
           F++   CLL+F++    L+ K
Sbjct: 301 FVSVWKCLLFFVSVLFILLVK 321


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 FLAALACLLYFIAAGLSLVAK 82
           F++   CLL+F++    L+ K
Sbjct: 301 FVSVWKCLLFFVSVLFILLVK 321


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 144 FLAALACLLYFIAAGLSLVAK 82
           F++   CLL+F++    L+ K
Sbjct: 301 FVSVWKCLLFFVSVLFILLVK 321


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 179 PSLEKTKPRLP 211
           PSL  T+P LP
Sbjct: 27  PSLSDTRPMLP 37


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 6/31 (19%), Positives = 18/31 (58%)
 Frame = -1

Query: 110 LRRASAWSLSIFVLAFSAFFLWMYSMSTRLF 18
           ++ + +W  + +++  + FF  +YS+   +F
Sbjct: 130 MKFSGSWKRARYLILAAWFFSALYSLPILIF 160


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.0 bits (37), Expect = 8.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 166 PPSWRQYVPRGACVPPL 116
           PP++   +P+G  + PL
Sbjct: 440 PPTYDYGIPQGVVLNPL 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,143
Number of Sequences: 336
Number of extensions: 616
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3844548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)