Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10j05
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   5.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   9.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   9.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 316 STARY*STWLGTASFRKLLHGLLW 245
           S  RY + W GTA+ +  + GLL+
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 150 CCHVSHQHG 124
           C HV H HG
Sbjct: 13  CLHVQHSHG 21


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 37  KYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYM 144
           K+ + +TD   K  Y+A   I V L  +   ++ Y+
Sbjct: 132 KHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYV 167


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 200 CPWR*TLRLCGRRSKPQKPMK*F 268
           C W+  +  C +  KP+K +  F
Sbjct: 80  CDWKGKVNNCDKLEKPRKVLPNF 102


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +1

Query: 211 LNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLLNYVVFSDNQMGTNFVFV 366
           L A T+W     T     ++ +  F   +FS  +   V ++ +++  NF ++
Sbjct: 17  LKALTVWHVENPTYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISENFYYL 68


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 135 HQHGRVGAQRHVNVRQRS 82
           H+  R   + H N+RQ++
Sbjct: 375 HEKARENLKHHANLRQKN 392


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 173 CKYSNSLNVAMY 138
           CKY N+  + MY
Sbjct: 224 CKYGNNCEIDMY 235


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 345 HLIVRKHHIIQQHV 304
           H I  +HH++  HV
Sbjct: 328 HHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,915
Number of Sequences: 336
Number of extensions: 2338
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)