Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10j02
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein. 145 2e-34
U46025-1|AAD03462.1| 913|Homo sapiens translation intiation fac... 145 2e-34
BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein. 145 2e-34
BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation ... 145 2e-34
BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation ... 145 2e-34
AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing... 145 2e-34
AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens ... 145 2e-34
AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation ... 145 2e-34
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 35 0.24
U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein. 30 8.9
J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein. 30 8.9
BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein. 30 8.9
AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha, non-er... 30 8.9
AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha, non-er... 30 8.9
AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha, non-er... 30 8.9
AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectr... 30 8.9
>U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>U46025-1|AAD03462.1| 913|Homo sapiens translation intiation factor
eIF-3 p110 subunit protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein.
Length = 252
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit C protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing
protein 17 protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ20732 fis, clone HEP08682. ).
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation
factor eIF-p110 protein.
Length = 913
Score = 145 bits (351), Expect = 2e-34
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Frame = +3
Query: 156 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 317
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 318 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKEENGVAPRFFIRALVELDDWV 497
+I +IRN KI+D + L FE L KAY +A +V KE GV PRF+IR L +L+D++
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE--GV-PRFYIRILADLEDYL 117
Query: 498 VGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDLPDDNE 656
W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+ D +
Sbjct: 118 NELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPEQSADED 170
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 35.1 bits (77), Expect = 0.24
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = +3
Query: 255 DDEEETKRVVRSMKEKRYE--ELEGII-----HSIRNHRKIKDFSSALASFEELQKAYTR 413
D E E +++ +K+K +E +L+ I HS++ +KIK+ + + EE +A
Sbjct: 1072 DLENEKQQIEEKLKKKEFELSQLQARIDDEQVHSLQFQKKIKELQARIEELEEEIEAEHT 1131
Query: 414 AAPVVQKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYT 593
++K+ + +A R L E+ + + A A+ ++K +R+ L + T
Sbjct: 1132 LRAKIEKQRSDLA-----RELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLEEAT 1186
Query: 594 KDFEAEISKFRE 629
EA + R+
Sbjct: 1187 LQHEATAATLRK 1198
>U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein.
Length = 2477
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
>J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein.
Length = 2472
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
>BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein.
Length = 2452
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
>AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2472
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
>AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2477
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
>AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) variant protein.
Length = 2506
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 72 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 124
Query: 609 EI 614
E+
Sbjct: 125 EV 126
>AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectrin
alpha protein.
Length = 2452
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 429 QKEENGVAPRFFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEA 608
QK E+ +FF R EL+ W+ +E + S N K T+L+ KL+K+ + FEA
Sbjct: 38 QKLEDSYRFQFFQRDAEELEKWI------QEKLQIASDENYKDPTNLQGKLQKH-QAFEA 90
Query: 609 EI 614
E+
Sbjct: 91 EV 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,569,404
Number of Sequences: 237096
Number of extensions: 1412175
Number of successful extensions: 3721
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3713
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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