Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i24
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   2.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.8  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 685 RHREAHRNVAYPPPLRCDS 629
           RH+    +  Y PPL CDS
Sbjct: 33  RHKNLEGSAMYVPPLYCDS 51


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 679 REAHRNVAYPPPLRCDSGS 623
           R  H+++AYP P R  +G+
Sbjct: 789 RHQHQSLAYPRPARSTTGA 807


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 486 AHRTWPVPHVWCVPRRGRV 430
           AHR  P  H W   +RG V
Sbjct: 900 AHRLIPEVHSWMAQKRGEV 918


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,587
Number of Sequences: 2352
Number of extensions: 15155
Number of successful extensions: 74
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)