Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10i18
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alp... 129 2e-30
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 101 7e-22
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 42 3e-04
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 40 0.002
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 40 0.002
AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical ... 33 0.21
Z83231-2|CAB05750.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming ... 28 5.9
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL021483-4|CAE46681.1| 139|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical
protein B0365.3 protein.
Length = 996
Score = 129 bits (312), Expect = 2e-30
Identities = 57/95 (60%), Positives = 73/95 (76%)
Frame = +2
Query: 413 DLEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWV 592
+L DLKQE+ +D H V EEL R T+ E GL+ KA+E L ++GPNAL+PP+ TPEW+
Sbjct: 9 ELHDLKQEVKMDEHIVPIEELVARLGTNLETGLTRQKAQEVLAKNGPNALSPPETTPEWI 68
Query: 593 KFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEP 697
KFCKNLFGGFA+LLW+GAILC+IAY + T+E P
Sbjct: 69 KFCKNLFGGFAMLLWVGAILCYIAYSVDYFTMEYP 103
>U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alpha
subunit protein.
Length = 996
Score = 129 bits (312), Expect = 2e-30
Identities = 57/95 (60%), Positives = 73/95 (76%)
Frame = +2
Query: 413 DLEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWV 592
+L DLKQE+ +D H V EEL R T+ E GL+ KA+E L ++GPNAL+PP+ TPEW+
Sbjct: 9 ELHDLKQEVKMDEHIVPIEELVARLGTNLETGLTRQKAQEVLAKNGPNALSPPETTPEWI 68
Query: 593 KFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEP 697
KFCKNLFGGFA+LLW+GAILC+IAY + T+E P
Sbjct: 69 KFCKNLFGGFAMLLWVGAILCYIAYSVDYFTMEYP 103
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 101 bits (241), Expect = 7e-22
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2
Query: 416 LEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 595
LEDLK+++ ID H++ + L++R+ T +NG+S A+A L RDGPNALTPPKQT +W+K
Sbjct: 48 LEDLKKDVVIDDHEIPLDALFKRYTTSEKNGISEAEATNRLNRDGPNALTPPKQTSKWIK 107
Query: 596 FCKNLFGGFALLLWIGAILCFIAYGIQASTVEE 694
++FGGF LLW A + YG+ S ++
Sbjct: 108 LAGSIFGGFNFLLWCAASASAVGYGMDLSMSDD 140
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 101 bits (241), Expect = 7e-22
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2
Query: 416 LEDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 595
LEDLK+++ ID H++ + L++R+ T +NG+S A+A L RDGPNALTPPKQT +W+K
Sbjct: 48 LEDLKKDVVIDDHEIPLDALFKRYTTSEKNGISEAEATNRLNRDGPNALTPPKQTSKWIK 107
Query: 596 FCKNLFGGFALLLWIGAILCFIAYGIQASTVEE 694
++FGGF LLW A + YG+ S ++
Sbjct: 108 LAGSIFGGFNFLLWCAASASAVGYGMDLSMSDD 140
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 506 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAY 667
GLS A E LE DG NAL+PPK W F + +L++ A L +AY
Sbjct: 66 GLSKQVAAERLESDGRNALSPPKVISNWKLFLRQFKNLLWILMFGAAALSLVAY 119
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 506 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAY 667
GL+ +A + L+ DG NAL+PPK F + +L++ A LCF+ Y
Sbjct: 66 GLTKQEAAQKLKTDGKNALSPPKTISNMELFVRQFKNLLWVLMFGAAALCFLTY 119
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 506 GLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGAILCFIAY 667
GL+ +A + L+ DG NAL+PPK F + +L++ A LCF+ Y
Sbjct: 66 GLTKQEAAQKLKTDGKNALSPPKTISNMELFVRQFKNLLWVLMFGAAALCFLTY 119
>AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical
protein Y58A7A.5 protein.
Length = 349
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = -3
Query: 499 RVRLKSLVEFLRSDFMVINIQLLFEIF*ISWFPFFRGRFSACLELSVSCS 350
R +L SLV L+S F+ N Q L ++F I +FP F R S L++ SC+
Sbjct: 2 RHKLGSLVYRLKSRFLSNNFQFL-QLF-IFYFPGFISRMSPSLQMPASCA 49
>Z83231-2|CAB05750.1| 357|Caenorhabditis elegans Hypothetical
protein F57G9.2 protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -1
Query: 360 SAVLLSSSIGPMVATRYESVRPCSPIFVSLYVQADKRNKPPLGLVCIPQRCRV 202
S +++ SIGP +A R V C+P+ V +++ N+ L +C P+R R+
Sbjct: 181 SLAIITQSIGPFLA-RLPFVI-CAPLSVLVFLFIKHTNQSLLKEICNPKRTRI 231
>Z81479-9|CAE17735.1| 215|Caenorhabditis elegans Hypothetical
protein C34F6.11 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 587 WVKFCKNLFGGF--ALLLWIGAILCFIAYGIQAST 685
W FC +++ F ALL ++G +LCF G+ ST
Sbjct: 57 WTFFCYSVYINFIFALLAFVGGVLCF-TLGLYYST 90
>AF016424-6|AAB65333.1| 366|Caenorhabditis elegans Transforming
growth factor betafamily protein 2 protein.
Length = 366
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 503 NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLF 613
N SHA + L R PN+ TP K P + K LF
Sbjct: 307 NATSHAIVQSTLHRVRPNSTTPAKCAPSSLGSYKILF 343
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 294 MDAPTRTASPPSARSRMIIEQLTDSSRHAENLPRKNGN 407
+ PT TA+P ++ S I+ +T H P KN N
Sbjct: 78 VSTPTPTAAPTTSLSSTIVRNMTAPLLHQNQKPPKNLN 115
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 422 DLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERD--GPNALTPPKQTPEWVK 595
DL L + H T +EL FQ N S K ++ E + G N PP WV
Sbjct: 338 DLNCALILGKH-YTQKELPNAFQKLTINSASEVKIGKHAETEDSGTNGPMPPALMKSWVN 396
Query: 596 FCKN 607
F N
Sbjct: 397 FIFN 400
>AL021483-4|CAE46681.1| 139|Caenorhabditis elegans Hypothetical
protein Y38H8A.7 protein.
Length = 139
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 456 KSLLRNSTKDFKRTRKMALVMQKRKRT*KETAPMLLHHLNKHPNG*SFVKIYSAALHC 629
+S +R DFK RK+A + K K P LLH + HPN + + L+C
Sbjct: 35 ESFVRTMDWDFKELRKIA---ENSKS--KTIPPELLHTFSVHPNSVNHQILQGRLLNC 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,274,766
Number of Sequences: 27780
Number of extensions: 379637
Number of successful extensions: 983
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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