Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10i17
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41429 Cluster: Uncharacterized 19.2 kDa protein in EGT... 298 5e-80
UniRef50_O10299 Cluster: Uncharacterized 18.4 kDa protein; n=7; ... 122 5e-27
UniRef50_Q4KST5 Cluster: PKIP; n=2; Nucleopolyhedrovirus|Rep: PK... 52 7e-06
UniRef50_Q0N3Z4 Cluster: PKIP; n=1; Clanis bilineata nucleopolyh... 52 1e-05
UniRef50_A0EZ07 Cluster: PK interacting protein; n=1; Ecotropis ... 47 3e-04
UniRef50_A1YJ21 Cluster: Protein kinase-interacting protein 1; n... 45 0.001
UniRef50_Q9YML7 Cluster: LdOrf-110 peptide; n=1; Lymantria dispa... 44 0.003
UniRef50_Q22LP4 Cluster: Putative uncharacterized protein; n=2; ... 37 0.27
UniRef50_A6LXY6 Cluster: Sensor protein; n=1; Clostridium beijer... 37 0.35
UniRef50_Q91BT3 Cluster: Pkip-1; n=3; Nucleopolyhedrovirus|Rep: ... 35 1.1
UniRef50_UPI0000E87E9C Cluster: DNA repair protein RecN; n=1; Me... 35 1.4
UniRef50_Q7QXB3 Cluster: GLP_741_50228_49188; n=1; Giardia lambl... 34 2.5
UniRef50_Q4YJL4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_A2FMG7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_A2DF20 Cluster: Putative uncharacterized protein; n=2; ... 33 3.3
UniRef50_A6L3E2 Cluster: Thiol-disulfide isomerase and thioredox... 33 5.8
UniRef50_A5K8C0 Cluster: Translation elongation factor, putative... 32 7.6
UniRef50_A5K6K4 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
UniRef50_A2GI66 Cluster: Putative uncharacterized protein; n=14;... 32 7.6
UniRef50_A0DEL8 Cluster: Chromosome undetermined scaffold_48, wh... 32 7.6
>UniRef50_P41429 Cluster: Uncharacterized 19.2 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 19.2 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 169
Score = 298 bits (732), Expect = 5e-80
Identities = 144/169 (85%), Positives = 152/169 (89%)
Frame = +1
Query: 10 MSCILTAFCKKNQANLNSLITLQXXXXXXXXXXXXETAIDKMLCIAADIKGQVEQLELVN 189
MSCILTA CKK QANLNSLI LQ ETAIDKMLCIAADIKGQVEQLELVN
Sbjct: 1 MSCILTALCKKGQANLNSLIKLQNKKVKNYYVKNNETAIDKMLCIAADIKGQVEQLELVN 60
Query: 190 QYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFI 369
QYL AP+SEKL+FVY+CSDLDINE+DLKSLCLTKNIAYFT++YNAPTVLKAQ AVYD+FI
Sbjct: 61 QYLGAPESEKLDFVYDCSDLDINEKDLKSLCLTKNIAYFTQKYNAPTVLKAQAAVYDSFI 120
Query: 370 KHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYLIENSI 516
KHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEY+IENSI
Sbjct: 121 KHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYVIENSI 169
>UniRef50_O10299 Cluster: Uncharacterized 18.4 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 18.4 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 166
Score = 122 bits (294), Expect = 5e-27
Identities = 67/165 (40%), Positives = 92/165 (55%)
Frame = +1
Query: 10 MSCILTAFCKKNQANLNSLITLQXXXXXXXXXXXXETAIDKMLCIAADIKGQVEQLELVN 189
M L A K +A LN+ Q E +KML +AA+I GQVEQLE +
Sbjct: 1 METDLAAIVHKKRALLNAAFKQQDKKIAKYFAKPCENDAEKMLMLAAEIHGQVEQLEALL 60
Query: 190 QYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFI 369
A ++K EF +CSDLDI+ +DL+ +C + YF +Y+A TVL A PA YD F+
Sbjct: 61 SVARASDADKREFARDCSDLDIDAQDLQRMCASNEPTYFAAKYDAATVLAAHPAAYDGFL 120
Query: 370 KHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYLI 504
HSE F++A+ ++ N D L + K AI+HLCALEYL+
Sbjct: 121 GHSERFVDAMRSLN----APNADADYLAQRKCAAIRHLCALEYLV 161
>UniRef50_Q4KST5 Cluster: PKIP; n=2; Nucleopolyhedrovirus|Rep: PKIP
- Chrysodeixis chalcites nucleopolyhedrovirus
Length = 167
Score = 52.4 bits (120), Expect = 7e-06
Identities = 36/135 (26%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Frame = +1
Query: 115 ETAIDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKN 294
E+AID+M AA + G EQL + + + +++F+ + ++LD + +++ L T++
Sbjct: 36 ESAIDEMTTCAAYLYGVEEQL--FSLLSNVSQERRMDFINDLTELDFSNYEIELLLNTRS 93
Query: 295 IAYFTERYNAPTVLKAQPAVYDA----FIKHSELFINAICQMDEKQQVNNFCLDELVKLK 462
Y ++++ + ++ + F+K E F+ + + K++ + L+ELV LK
Sbjct: 94 DEYLLKKFHVHKKSENIQKIFKSNSIRFVKVLEQFV--VKRRAYKKKPKDTLLEELVILK 151
Query: 463 LIAIKHLCALEYLIE 507
I IKHLC +E L +
Sbjct: 152 SIIIKHLCIMEKLTQ 166
>UniRef50_Q0N3Z4 Cluster: PKIP; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: PKIP - Clanis bilineata
nucleopolyhedrosis virus
Length = 184
Score = 51.6 bits (118), Expect = 1e-05
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Frame = +1
Query: 142 IAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYN 321
++A + G EQL + + +++FV N S+ D +++ + KN +F ++++
Sbjct: 59 LSAQLFGYEEQLFSLQN--NTTHEHQVDFVNNLSEFDFTNAEIEQIVEEKNDKFFMDKFD 116
Query: 322 APTVLKAQPAVYDAFIKHSELFINAICQMDEKQQV-----NNFCLDELVKLKLIAIKHLC 486
A + + F K+S+ FI + + K+ V N+ L ELV LK IKHLC
Sbjct: 117 AA---RLNHHLQSIFRKNSQSFIKGLVEFVNKRNVYRKKPNDRLLQELVLLKAKIIKHLC 173
Query: 487 ALEYLIE 507
++ L E
Sbjct: 174 VMQKLAE 180
>UniRef50_A0EZ07 Cluster: PK interacting protein; n=1; Ecotropis
obliqua NPV|Rep: PK interacting protein - Ecotropis
obliqua NPV
Length = 189
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/131 (22%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Frame = +1
Query: 130 KMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFT 309
++ ++A + G EQ+ ++ L ++ K++F+ N ++L + + ++++ T+ +
Sbjct: 58 ELYIMSAVLFGMDEQVYSLDNNLS--EANKIDFINNLNELGLQNDMVETMYKTQELDELL 115
Query: 310 ERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQV-----NNFCLDELVKLKLIAI 474
++Y+ + + ++++ F+ + Q K+ NN LDE+V LK + I
Sbjct: 116 KQYSIDAI--TNEIIVKVLKRNAKNFVGVLLQFLNKRNAYRKNANNSLLDEVVFLKALLI 173
Query: 475 KHLCALEYLIE 507
KHLC ++ L E
Sbjct: 174 KHLCTMQKLSE 184
>UniRef50_A1YJ21 Cluster: Protein kinase-interacting protein 1; n=3;
Nucleopolyhedrovirus|Rep: Protein kinase-interacting
protein 1 - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 175
Score = 44.8 bits (101), Expect = 0.001
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Frame = +1
Query: 127 DKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDL-DINEEDLKSLCLT-KNIA 300
+++ +AA+ G EQL N + + + +F+ N ++L D N E ++ + +N
Sbjct: 47 NELKIMAAEQFGIEEQL--YNLRHNNTDNRRRDFINNFNELVDFNNEHIEHMYNNDENDD 104
Query: 301 YFTERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQV-----NNFCLDELVKLKL 465
++YN + + A+ D F K++ FI + Q +K+ V N L+ELV LK
Sbjct: 105 LLIKKYN---ITEKPKAIQDVFKKNNRKFIKILKQFIDKRNVYRSNENVALLEELVLLKC 161
Query: 466 IAIKHLCALEYL 501
IKHLC +E L
Sbjct: 162 NLIKHLCVMEKL 173
>UniRef50_Q9YML7 Cluster: LdOrf-110 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-110 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 179
Score = 43.6 bits (98), Expect = 0.003
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +1
Query: 169 EQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQP 348
EQL + KS K EFV + +LD + E ++SL +++ A +Y A + +
Sbjct: 57 EQLNCLELNAKTDKS-KAEFVGDLYELDFDNEQIESLLESRDPAALVAKYGAHRLPEFLR 115
Query: 349 AVYDAFIKHSELFINAICQMDEKQQV------NNFCLDELVKLKLIAIKHLCALEYLIEN 510
+D +++E + I + K++V N LDELV LK IKHLC +E L +
Sbjct: 116 RSFD---QNAEGLVRVIGEFVAKRKVHWKKNDNVQLLDELVYLKSKMIKHLCMIEKLSDK 172
Query: 511 S 513
+
Sbjct: 173 A 173
>UniRef50_Q22LP4 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2621
Score = 37.1 bits (82), Expect = 0.27
Identities = 30/97 (30%), Positives = 53/97 (54%)
Frame = +1
Query: 211 SEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFIKHSELFI 390
S L+F YNCS++ INE +K+ +T+ ++ E+ + + K A D + ++L+
Sbjct: 1925 SNLLKF-YNCSNILINEIIIKNTLITRGSMFYFEKIDILNITKLN-AQLDKTL--NKLYK 1980
Query: 391 NAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYL 501
+ I EKQ +N+ D+L K+ L+ +K C YL
Sbjct: 1981 DQIFDSQEKQNINS---DDL-KIYLLTLKG-CFSNYL 2012
>UniRef50_A6LXY6 Cluster: Sensor protein; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Sensor protein -
Clostridium beijerinckii NCIMB 8052
Length = 1024
Score = 36.7 bits (81), Expect = 0.35
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 178 ELVNQYLDAPKSEKLEFVYNCSDLDINEED---LKSLCLTKNIAYFTERYNAPTVLKAQP 348
E +N+Y K + LE+ +N S + +ED +K+L T+N+ TE+ N+ T++K Q
Sbjct: 447 EKINEYRMTLKRKGLEYHFNVSGSPLYDEDGDIVKALLCTRNV---TEQVNSNTIIKMQK 503
Query: 349 AVYDAFIKH 375
+A I++
Sbjct: 504 KQLEAVIEN 512
>UniRef50_Q91BT3 Cluster: Pkip-1; n=3; Nucleopolyhedrovirus|Rep:
Pkip-1 - Helicoverpa armigera NPV
Length = 169
Score = 35.1 bits (77), Expect = 1.1
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Frame = +1
Query: 127 DKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYF 306
++++ ++A ++G EQL + + D + +L F+ + + D + E ++ L + I
Sbjct: 40 NEIVHLSALLRGYEEQLYALRRSYD--EKRQLNFINDIGEFDFSCEQIEQLMESDKI--L 95
Query: 307 TERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQVNN-----FCLDELVKLKLIA 471
++RY A + + +D +S+ F + Q +K+ L ELV LK
Sbjct: 96 SDRYRAIDLNETLRKYFD---NNSQKFTKILKQFVQKRNAYRKSPKLTLLQELVFLKSNL 152
Query: 472 IKHLCALEYL 501
I HLC LE L
Sbjct: 153 IWHLCVLETL 162
>UniRef50_UPI0000E87E9C Cluster: DNA repair protein RecN; n=1;
Methylophilales bacterium HTCC2181|Rep: DNA repair
protein RecN - Methylophilales bacterium HTCC2181
Length = 551
Score = 34.7 bits (76), Expect = 1.4
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 259 EEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFIKHSELFINAICQMDEKQQ---VN 429
+E L S ++N+A +E NA +V A Y+AF K+ E FIN + +++EK +
Sbjct: 143 KEILDSFARSQNLA--SEVKNAYSVWVALLKEYEAFAKNRESFINELEELEEKYKDFNAL 200
Query: 430 NFCLDELVKLK 462
NF LD +LK
Sbjct: 201 NFSLDGWEQLK 211
>UniRef50_Q7QXB3 Cluster: GLP_741_50228_49188; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_741_50228_49188 - Giardia lamblia
ATCC 50803
Length = 346
Score = 33.9 bits (74), Expect = 2.5
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 175 LELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAV 354
L+L+ A + + E C D DLKSLC + + + + A T L Q ++
Sbjct: 2 LDLLRNLYRAMEGDNTELACTCIPSDSQIPDLKSLCSSLSYSNLVDGLLAVTWL-LQQSI 60
Query: 355 YDAFIKHSELFINAI--CQMDEKQQV 426
+A+ K++ NAI C +D+ ++V
Sbjct: 61 GEAYNKYASCLGNAIMRCCIDQAREV 86
>UniRef50_Q4YJL4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 66
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 515 ILFSIKYSNAHKCLIAISFNFTNSSKQKLFTCCFS 411
I +IKY+N + C+I + +F SK ++FTC S
Sbjct: 3 ICMNIKYNNVYLCVIMENISFKKCSKIRIFTCKIS 37
>UniRef50_A2FMG7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 828
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 118 TAIDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFV 231
T+I +LC AD K + E L + Q + P+ E L+F+
Sbjct: 95 TSIQPLLCSKADPKNRSESLHFIKQIISKPEIEYLDFI 132
>UniRef50_A2DF20 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1424
Score = 33.5 bits (73), Expect = 3.3
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = -1
Query: 524 FIYILFSIKYSNAHKCLIAISFNFTNSSKQKLFTCCFSSI*HMAFINNSL-CFMNAS*TA 348
F Y+ F IKY ++ S FTN + LF+ C S + I ++ + A
Sbjct: 1029 FNYLRF-IKYVTTLALKLSSSGAFTNDANSNLFSQCLSIRNFASSIKPTMKLTLEAIEKL 1087
Query: 347 GWAFSTVGALYLS--VKYAIFLVKHRDFKSSSFISKSEQLY 231
ST+ ++LS V Y I K + F ++ + KSE++Y
Sbjct: 1088 SHCVSTIENIFLSNGVNYDILFGKCKLFVKTANLKKSEEIY 1128
>UniRef50_A6L3E2 Cluster: Thiol-disulfide isomerase and thioredoxin;
n=1; Bacteroides vulgatus ATCC 8482|Rep: Thiol-disulfide
isomerase and thioredoxin - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 446
Score = 32.7 bits (71), Expect = 5.8
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 205 PKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVLKAQPAVYDAFIKHSEL 384
P+S+ L+ V + ++ E + + KN+ + ERY + A AV+D ++K L
Sbjct: 236 PESKSLDAVVRYVESEVKEPGIAEFLINKNVYAYVERYGLDSA-DAYCAVFDRYVKSPLL 294
Query: 385 FIN 393
N
Sbjct: 295 VKN 297
>UniRef50_A5K8C0 Cluster: Translation elongation factor, putative;
n=2; Plasmodium|Rep: Translation elongation factor,
putative - Plasmodium vivax
Length = 1389
Score = 32.3 bits (70), Expect = 7.6
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 4 VKMSCILTAFCKKNQANLNSLITLQXXXXXXXXXXXXETAIDKMLCIAADIKGQVE--QL 177
+ M+ T FCKK N+N+ ++ E I KM + +G Q
Sbjct: 307 IDMNIFSTLFCKKMNINMNNSEKIKKYMWNQYYFNTKEKKILKMTNDTSTYQGNSSGGQK 366
Query: 178 ELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIA-YFTER 315
+ + L +Y + ++ ++E +K LCL NI+ YF ++
Sbjct: 367 KKKKNLFSLVVLDFLWKIYEITTINRDDEQIKKLCLELNISTYFLKK 413
>UniRef50_A5K6K4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1047
Score = 32.3 bits (70), Expect = 7.6
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 124 IDKMLCIAADIKGQVEQLELVNQYLDA-PKSEK----LEFVYNCSDLDINEEDLKSLCLT 288
++ +L + D KG++E ++ +L A P +K L + LD+NE+ K++ L
Sbjct: 162 LEGILRKSIDAKGRLENIKRGLLFLKAFPSLKKNMNELFLIVKNVQLDVNEKVKKAIILH 221
Query: 289 KNIAYFTERYNAPTVLKAQPAVYDAFIKHSELFIN 393
N+ Y E + K D I SE F N
Sbjct: 222 SNLLYINEHEEIISYFKIYVPSIDVCIYSSEFFDN 256
>UniRef50_A2GI66 Cluster: Putative uncharacterized protein; n=14;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 397
Score = 32.3 bits (70), Expect = 7.6
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -1
Query: 293 FLVKHRDFKSSS--FISKSEQLYTNSSFSLLGASKYWFTSSSCS 168
FL R F SSS F+S S + +SS S L ++KY F SSSCS
Sbjct: 275 FLSSSRCFLSSSKYFLSCSRCSFLSSSCSFLSSTKY-FLSSSCS 317
>UniRef50_A0DEL8 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 462
Score = 32.3 bits (70), Expect = 7.6
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 157 KGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYFTERYNAPTVL 336
K ++++ N Y +++K+ L + +ED L + F E Y PT+
Sbjct: 79 KSLIKKINYCNDYYGLKQNQKVYEQNEKLQLILFDEDYHKLIKLFDEKEFLENYQIPTLF 138
Query: 337 KAQPAVYDAFIKHSELFINAICQ-MDEKQQVNNFCLDEL 450
+ + + HS I+ I Q D+ Q+N+ L L
Sbjct: 139 RQHKHIIEKIKNHSFKLIDLIEQCYDQSFQLNSTILSHL 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,322,137
Number of Sequences: 1657284
Number of extensions: 8135678
Number of successful extensions: 20091
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 19488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20077
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -