Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i16
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   9.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   9.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +1

Query: 82  YATIS--GSLGVLLPFTSREDHDFFQHLEM 165
           Y+TI      G L+     EDHD    +EM
Sbjct: 302 YSTIGTVSKAGELIHQIQTEDHDIIDEIEM 331


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 453 FFLELIAIFYFYINRKAYELIYN*LERISSSNV 355
           F + +I IF+F  N +A EL +  L     SNV
Sbjct: 535 FVVIVITIFFFTANVQAGELYFMSLLNPILSNV 567


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 453 FFLELIAIFYFYINRKAYELIYN*LERISSSNV 355
           F + +I IF+F  N +A EL +  L     SNV
Sbjct: 260 FVVIVITIFFFTANVQAGELYFMSLLNPILSNV 292


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 358 CLQVFLILRREYVPNHL 308
           C ++F   R EYV  HL
Sbjct: 241 CERLFEASREEYVTRHL 257


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 323 RSKSPAMAFCFPGSREL 273
           +S SP+ +  FPG R L
Sbjct: 7   QSTSPSASEAFPGGRTL 23


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 106 GVLLPFTSREDHDFFQHLEM 165
           G L+     EDHD    +EM
Sbjct: 343 GELIHQIQTEDHDIIDEIEM 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,100
Number of Sequences: 336
Number of extensions: 2343
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)