BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10i16
(455 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 2.2
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 2.9
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 6.7
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 22 8.9
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 22 8.9
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 22 8.9
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 22 8.9
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.2 bits (50), Expect = 2.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 169 MRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQ 297
MR E C +D S S Y V N I+ FN+ + GKQ
Sbjct: 3007 MRFECCIDCSQDASSITSNSYKVTNWINEIFEHFFNTANQGKQ 3049
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 2.9
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 169 MRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQ 297
MR E C +D S S Y V N I+ FN+ + GKQ
Sbjct: 3010 MRLEYCIDCSQDASSITSKSYKVTNWINEIFEHFFNTENQGKQ 3052
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 22.6 bits (46), Expect = 6.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 356 SSSFFDTSAGVRSKSPAMAFCFPGSRELNCSHRSPS 249
SS F +S G S S + + + SHRSP+
Sbjct: 1345 SSKFSTSSRGSGSDSGSHSISSAAQHDFQGSHRSPN 1380
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 22.2 bits (45), Expect = 8.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 103 ETH*LLHIVVLQNHQELMLLSVERLQFHQHE 11
E+H LL Q HQ+ ++ Q H+HE
Sbjct: 889 ESHKLLAENYRQQHQQQQQQQQQQQQQHEHE 919
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 22.2 bits (45), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 175 SENSPLCGRDHLSFRSYYYPVKNVI 249
S + +C R + SFR YY N++
Sbjct: 122 SPHVDVCERAYESFRCYYEQYGNIV 146
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 22.2 bits (45), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 175 SENSPLCGRDHLSFRSYYYPVKNVI 249
S + +C R + SFR YY N++
Sbjct: 122 SPHVDVCERAYESFRCYYEQYGNIV 146
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 22.2 bits (45), Expect = 8.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 181 NSPLCGRDHLSFRSYY 228
NSP CG L+ R Y+
Sbjct: 94 NSPTCGAQQLADRIYF 109
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,600
Number of Sequences: 2352
Number of extensions: 8148
Number of successful extensions: 42
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -