Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i14
         (260 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   0.41 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   0.41 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   0.41 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   0.72 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   0.95 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   2.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   5.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   6.7  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    19   8.8  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    19   8.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   8.8  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 0.41
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 178 RHIFFAHQLANICDIF 131
           +H +FAH+  +ICD F
Sbjct: 110 KHGYFAHEEPHICDKF 125


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 0.41
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 208 AIVKLVIVLARHIFFAHQLANICDIF--VNRFF 116
           + V LV+    H+F    L++ICD F  +N+ F
Sbjct: 189 SFVPLVVNALDHLFLNDILSDICDKFEQINQHF 221


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 0.41
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 208 AIVKLVIVLARHIFFAHQLANICDIF--VNRFF 116
           + V LV+    H+F    L++ICD F  +N+ F
Sbjct: 145 SFVPLVVNALDHLFLNDILSDICDKFEQINQHF 177


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 0.72
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 67  CCKNCATNNY 38
           CCKNCA  +Y
Sbjct: 797 CCKNCARVDY 806



 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 73  GCCCKNCATNNY 38
           G CCK C  + Y
Sbjct: 102 GRCCKTCPGDLY 113


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 0.95
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 19  CLCCTMDNYSLHNFYNNNRKPLKPTTLH 102
           CL   +  Y L + Y   +K   P +LH
Sbjct: 273 CLSTRLFYYQLTDLYKKIKKAFPPLSLH 300



 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 142 CDIFVNRFF*CY 107
           C  F  +FF CY
Sbjct: 415 CSSFFQQFFHCY 426


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 206 DCKTCDRARQAYFLCTSACEHM*YF 132
           DC    R  Q + LC S C    YF
Sbjct: 71  DCYMLFREPQLHNLCRSECFSTKYF 95


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 28 CTMDNYSLHNFYN 66
          CT+ N SLH+  N
Sbjct: 19 CTVSNVSLHSLKN 31


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 226 CSPGCFSL 233


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 540 CSPGCFSL 547


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 800 CSPGCFSL 807


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 800 CSPGCFSL 807


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 773 CSPGCFSL 780


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 773 CSPGCFSL 780


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 800 CSPGCFSL 807


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 186 CSPGIFSL 163
           CSPG FSL
Sbjct: 800 CSPGCFSL 807


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 124 GLRKYHICSQADVQRKYAWRARSQVLQ 204
           G  K+ IC ++D+   +      +VLQ
Sbjct: 321 GANKFVICGESDIFNGHLNPDNDEVLQ 347


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -1

Query: 206 DCKTCDRARQAYFLCTSACEHM*YFR 129
           DC    R  Q + LC   C    YF+
Sbjct: 71  DCYMLFREPQLHNLCRKNCFTTDYFK 96


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -1

Query: 206 DCKTCDRARQAYFLCTSACEHM*YFR 129
           DC    R  Q + LC   C    YF+
Sbjct: 71  DCYMLFREPQLHNLCRKNCFTTDYFK 96


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 54  QFLQQQPQTSQADNVTRW*H*KNRFTKISHMFAS 155
           QF+   PQ   A    R    +NR  ++++ FA+
Sbjct: 74  QFMPYGPQQQPASVARRNARERNRVKQVNNGFAT 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,635
Number of Sequences: 336
Number of extensions: 903
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)