Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10i12
(369 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 32 0.13
SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4) 30 0.67
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 0.89
SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 28 2.1
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 28 2.7
SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 27 3.6
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 4.4
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 4.8
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_47173| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_42190| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7) 27 6.3
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) 27 6.3
SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 26 8.3
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 26 8.3
SB_30621| Best HMM Match : SH3_2 (HMM E-Value=0.23) 26 8.3
SB_30268| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 26 8.3
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 26 8.3
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.3
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 26 8.3
SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19) 26 8.3
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 32.3 bits (70), Expect = 0.13
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 174 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 302
A+++ DADDED+++ +D+ +DD I D + + + D
Sbjct: 290 ADDYVNSDADDEDINIGDDDADDDDIYGDDDDDINSDDDAADD 332
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 174 AENWGTEDADDEDVSVWEDNWEDDVIQDDFN 266
A+++ DADDED++ +D +DD I D+N
Sbjct: 164 ADDYVNSDADDEDINSDDDAADDDNINGDYN 194
Score = 31.1 bits (67), Expect = 0.29
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDDVIQDD 260
G +DADDED+++ +D+ DD I D
Sbjct: 397 GDDDADDEDINIGDDDAADDDIYGD 421
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDDVIQDD 260
G DADDED++ +D +DD+ DD
Sbjct: 60 GDYDADDEDINGGDD--DDDIYGDD 82
>SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4)
Length = 153
Score = 29.9 bits (64), Expect = 0.67
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFN 266
+D DD++V +D+ EDDV+ DD++
Sbjct: 70 DDNDDDEVDDDDDDVEDDVLDDDYD 94
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.5 bits (63), Expect = 0.89
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQL 287
GTED + ED ED+ DD D N++ ++Q+
Sbjct: 1675 GTEDVEKEDTKKKEDDKADDESNDKGNRRRKRQI 1708
>SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 311
GTEDA E +SV ++ + Q Q++ +Q ++LKD +S
Sbjct: 487 GTEDAKSETLSVQDEELQGLQQQHALLQKMLEQQQQLKDLQS 528
>SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 177 ENWGTEDADDEDVSVWEDN--WEDDVIQDD 260
E G ED DD+D S ED+ + DDVI DD
Sbjct: 16 EYHGDEDDDDDDKSSKEDDEIYCDDVIDDD 45
>SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDD 260
+D DD+D V +D+ +DDV+ DD
Sbjct: 13 DDDDDDDDDVDDDDDDDDVVDDD 35
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDD 260
+ W ED DD+ W+D+ ED+ +D+
Sbjct: 1113 DKWEGEDEDDDIKESWDDDDEDEKKEDE 1140
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 302
D+ED +V ++ Q D ++Q++Q+L+KLKD
Sbjct: 6 DEEDGAVAPSATKNSQTQCDPDEQIQQRLQKLKD 39
>SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDD 260
+D DD+DV + +D+ +DDV DD
Sbjct: 76 DDVDDDDVDIGDDD-DDDVNDDD 97
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/40 (25%), Positives = 27/40 (67%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 311
E+ D+E+ + E+++++D+ DD L ++ E++ ++K+
Sbjct: 1836 EEEDEEEDEIEEEDYDEDIGDDD--DDLEEEAEEVAERKA 1873
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 225 EDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
EDN +DDV DD + R +K K+ K
Sbjct: 7437 EDNDDDDVSDDDVSGDNRSGGKKNKESK 7464
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 189 TEDADDEDVS 218
TED DD+DVS
Sbjct: 7436 TEDNDDDDVS 7445
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDD 245
G+ED +DED S +D ++DD
Sbjct: 1312 GSEDIEDEDCSRRDDEYDDD 1331
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 311
ED +++ W+ ++D I+D FN++ + + K QK+
Sbjct: 1147 EDKFNKEHKAWKPVYKDTYIEDKFNKEHKAWMHKSDYQKN 1186
>SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE +V D+ DDVI DD N + ++ E
Sbjct: 31 DDESKNVMNDH--DDVIDDDVNDETQEDKE 58
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + +++ E
Sbjct: 1258 DDESKDVMNDH--DDVIDDDVNDETQEEEE 1285
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 1323 DDESKDVMNDH--DDVIDDDVNDETQEDEE 1350
>SB_47173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 12 IYILRDSCVVTCILFILLH*VIFPYFNNHHSVMADKQKVDL 134
+Y++ D C++ ILFI L V + + + V A K +L
Sbjct: 293 LYVISDLCILNTILFITLLVVYYQHTYSKRHVPATCHKCNL 333
>SB_42190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 12 IYILRDSCVVTCILFILLH*VIFPYFNNHHSVMADKQKVDL 134
+Y++ D C++ ILFI L V + + + V A K +L
Sbjct: 330 LYVISDLCILNTILFITLLVVYYQHTYSKRHVPATCHKCNL 370
>SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7)
Length = 256
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQ 284
+N G +D+D + + N +DD +DD N + +Q
Sbjct: 211 DNGGDGGGNDDDDDIGDGNDDDDEDKDDNNSPVNEQ 246
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 177 ENWGTEDAD-DEDVSVWEDNWEDDVIQDDF 263
E +G +D+D D+DV+ ++N +DD + DD+
Sbjct: 397 EGYGDDDSDIDDDVN--DNNDDDDYMMDDY 424
>SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40)
Length = 370
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 192 LYPNFPREILRTRHPLLANQGLLSVCQPLHCDD 94
L+P+ RHPLLAN+ P C D
Sbjct: 316 LFPHSSGSSNYCRHPLLANKSRAETRNPFSCQD 348
>SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 186 GTEDADDEDVSVWEDNWEDDVIQDD 260
G +D DD+D V +D+ +D+ + DD
Sbjct: 46 GDDDDDDDDEDVDDDDDDDEDVDDD 70
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 1350 DDESKDVMNDH--DDVIDDDVNDETQEDEE 1377
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 550 DDESKDVMNDH--DDVIDDDVNDETQEDEE 577
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 108 DDESKDVMNDH--DDVIDDDVNDETQEDEE 135
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKL--KDQK 308
ED DDED ED+ E+D +D+ + L + + + KD+K
Sbjct: 209 EDDDDEDDEEEEDSDEEDESEDEVAEALTAKKKAVTPKDKK 249
>SB_30621| Best HMM Match : SH3_2 (HMM E-Value=0.23)
Length = 391
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 117 CQPLHCDDY*NKEISLNVAE*IRCKSQHNCHVK 19
C+P++C D N + + E +C HNC+ K
Sbjct: 85 CKPVNCMDKYNGKRTFFDKERGKCVPAHNCYTK 117
>SB_30268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQ 272
+D DD+DV +DN DD D FN +
Sbjct: 5 DDGDDDDVHDNDDNDGDDHNDDAFNDK 31
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 26.2 bits (55), Expect = 8.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 251 DDVVFP-VVFPNRYIFIISVFCTPIFRGKFFELVILF*QTKVYFLFV 114
D VVF VV+P ++F++ F IF F ++ +F +F+FV
Sbjct: 681 DSVVFAFVVYPYFFLFVVFAFVVFIFIFFFAFVIFVF---NAFFVFV 724
>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 26.2 bits (55), Expect = 8.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDD 260
+D DD+D + +D+ +DD QDD
Sbjct: 123 DDDDDDDAAAADDDDDDDEDQDD 145
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 26.2 bits (55), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 192 EDADDEDVSVWEDNWEDDVIQDDFN 266
+D DD+D +DN +DD DDF+
Sbjct: 497 DDGDDDDDDDDDDNDDDDDDDDDFH 521
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 36 DDESKDVMNDH--DDVIDDDVNDETQEDEE 63
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 207 DDESKDVMNDH--DDVIDDDVNDETQEDEE 234
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 279 DDESKDVMNDH--DDVIDDDVNDETQEDEE 306
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
DDE V D+ DDVI DD N + ++ E
Sbjct: 108 DDESKDVMNDH--DDVIDDDVNDETQEDEE 135
>SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)
Length = 461
Score = 26.2 bits (55), Expect = 8.3
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 174 REILRTRHP-LLANQGLLSVCQPLHCD 97
RE +R R +L N L SVCQPL CD
Sbjct: 385 RESMRARSSDILGN--LKSVCQPLFCD 409
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,757,733
Number of Sequences: 59808
Number of extensions: 159937
Number of successful extensions: 1767
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 594991920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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