Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i12
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical ...    50   7e-07
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    27   3.2  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical...    27   3.2  
L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans chrom...    27   4.2  
AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine r...    27   4.2  
Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U41105-12|AAA82406.1|  556|Caenorhabditis elegans Hypothetical p...    27   5.5  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical ...    26   7.3  
AF003130-3|AAB54123.1|  849|Caenorhabditis elegans Hypothetical ...    26   7.3  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z99268-1|CAB16466.1|  715|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z81573-4|CAB04627.1|  715|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z49908-10|CAA90103.1|  715|Caenorhabditis elegans Hypothetical p...    26   9.7  
EU068465-1|ABU49430.1|  715|Caenorhabditis elegans PRO-2 protein.      26   9.7  

>AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical
           protein Y119D3B.15 protein.
          Length = 82

 Score = 49.6 bits (113), Expect = 7e-07
 Identities = 16/42 (38%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 171 PAENWGTE-DADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 293
           P + W    + +++DV+VWEDNW+D+  + +F++QL+++L K
Sbjct: 35  PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 192 EDADDEDVSVWEDNWEDDVIQDDF 263
           +D DDED   +ED+ E+DVI D++
Sbjct: 718 DDDDDEDCDDFEDD-EEDVIDDEY 740


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           ED DDED    ED  E+D  ++D  ++  +  E+ +D +
Sbjct: 576 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDE 614


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           ED DDED    ED  E+D  ++D  ++  +  E+ +D +
Sbjct: 586 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDE 624


>AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical
           protein Y54G11A.14 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +3

Query: 192 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 290
           +D ++ED    ED  ED+   D+ N++++++ E
Sbjct: 59  DDEEEEDEDEEEDEAEDEAEDDEENEEVKEEKE 91


>L13200-3|AAA28192.1|  304|Caenorhabditis elegans C.elegans
           chromodomain proteinprotein 1 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 171 PAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQ-QLEKLKDQK 308
           P E    E  D+E+    ED  ED+ +++D  ++    QLE  K++K
Sbjct: 165 PEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEK 211


>AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 19 protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 131 VYFLFVSHYTVMIIEIRKYH 72
           VY LFV  Y+++  E+RKYH
Sbjct: 63  VYLLFVIAYSLIPEELRKYH 82


>Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical
           protein W01G7.4 protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 198 ADDEDVSVWEDNWEDD 245
           ADDED S  EDNW +D
Sbjct: 171 ADDEDDSNDEDNWRND 186


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 228 DNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           D  +DDV  DD + + R+Q  +LK QK
Sbjct: 664 DEEDDDVASDDPDAEKRRQKRRLKRQK 690


>U41105-12|AAA82406.1|  556|Caenorhabditis elegans Hypothetical
           protein T02G5.12 protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +3

Query: 201 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKL 296
           DD+D   + D +ED+V + D+N++  +++  L
Sbjct: 190 DDDDDGEYNDVFEDEVKKIDYNKRFEEKVSLL 221


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 195  DADDEDVSVWEDNWEDDVIQDDFNQQL 275
            D  DED+  +EDNW   +I + FN +L
Sbjct: 1079 DEIDEDIKQFEDNW---LIYEMFNNEL 1102


>AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical
           protein T10B5.3 protein.
          Length = 295

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 174 AENWGTEDADDEDVSVWEDNWEDDVIQDD 260
           +E++ T  +DD+  S  +D WED+ +++D
Sbjct: 226 SEDFDTIGSDDDGESSEDDWWEDNELKED 254


>AF003130-3|AAB54123.1|  849|Caenorhabditis elegans Hypothetical
           protein F55A12.5 protein.
          Length = 849

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 117 KQKVDLGXXXXXXXXXXXPAENWGTEDADDEDV-SVWEDNWEDDVIQDDFNQQLRQQLEK 293
           K+KV++              E+   E  DDED    +E+  E++V  DDF  +   QLE+
Sbjct: 661 KKKVEIPVISSESEEEEYEEEDEYEEYEDDEDEDEYYEEEEENEVEDDDFLTE--TQLEE 718

Query: 294 LKDQ 305
           L +Q
Sbjct: 719 LMEQ 722


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 177  ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQ 305
            E W  E +DD  VS W ++  DD++    N    ++   LK++
Sbjct: 2425 EQW--EYSDDSSVSTWFNDGTDDILNRLINSDYLEEHMILKER 2465


>Z99268-1|CAB16466.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           E+ G +D DD++    E+  E D  +DD     + +++K++  K
Sbjct: 97  EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140


>Z81573-4|CAB04627.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           E+ G +D DD++    E+  E D  +DD     + +++K++  K
Sbjct: 97  EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140


>Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical
           protein F57G4.8 protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 195 DADDEDVSVWEDNWED 242
           D DDEDV  W +N +D
Sbjct: 140 DNDDEDVQYWRENVDD 155


>Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical
           protein ZC443.4 protein.
          Length = 389

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 192 EDADDEDVSVWEDNWEDDV-IQDDFNQQLRQQ 284
           ED DD+D    E+N EDD  ++DD + +   Q
Sbjct: 277 EDDDDDDDEEEEENVEDDENLEDDEDDRTEDQ 308


>Z49908-10|CAA90103.1|  715|Caenorhabditis elegans Hypothetical
           protein C07E3.2 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           E+ G +D DD++    E+  E D  +DD     + +++K++  K
Sbjct: 97  EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140


>EU068465-1|ABU49430.1|  715|Caenorhabditis elegans PRO-2 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 177 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQK 308
           E+ G +D DD++    E+  E D  +DD     + +++K++  K
Sbjct: 97  EDDGDDDEDDDEDDEDEEEEESDDDEDDEEDDDKTKIKKIRKPK 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,676,184
Number of Sequences: 27780
Number of extensions: 121937
Number of successful extensions: 495
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)