Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i09
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 466  FPMSSRFTTNISVRCRRLLLCTF 534
            FP   R   N+ + C  L LC F
Sbjct: 1117 FPSKIRICWNVLLNCVYLFLCGF 1139


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 252 RFEFI-NPDEIASGKRLIIKHLQDESQSDI 166
           R+E + NP  + SGK L IK + +++   +
Sbjct: 53  RYESLTNPSRLDSGKELYIKIIPNKNDGTL 82


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 346 LAKHVLGVVQCAQLGQTSPYKLFVANNC 429
           L K++  V     + + S Y LFVA+NC
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLFVASNC 123


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 346 LAKHVLGVVQCAQLGQTSPYKLFVANNC 429
           L K++  V     + + S Y LFVA+NC
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLFVASNC 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,515
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)