Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10i07
(311 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 30 0.006
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 0.99
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 22 1.7
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 22 1.7
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 3.0
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 3.0
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 3.0
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 4.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 20 6.9
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 19 9.2
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 19 9.2
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 29.9 bits (64), Expect = 0.006
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = -2
Query: 310 FFFSNKKIYSLFYTCTFPNVYRQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQSL 143
+++ + +L++ F R LQ + A ++ P R+F+C+ C + +SY L
Sbjct: 41 YYYQYLQNAALYHKLQFRGPPRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYNLL 96
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 0.99
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 28 MIRTSSHVLNVQENIMTSNCASSPYSCEATSAC 126
M++ LNVQ +T NCA+ S C
Sbjct: 547 MLKNRFVTLNVQLTKLTKNCATKAQSVVLGRIC 579
Score = 20.6 bits (41), Expect = 4.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 62 WTFST*LLVLI 30
W+FST LLV+I
Sbjct: 162 WSFSTGLLVMI 172
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.8 bits (44), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 67 NIMTSNCASSPYSCEATSACAEAQQVMID 153
+I++ A +S A+ AC E + VM+D
Sbjct: 92 DILSGAIACIGFSWIASPACTELEVVMLD 120
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.8 bits (44), Expect = 1.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 162 FLSHVHRRHTNRRKGAMRRAFGR 230
F+SH+H N+ + FGR
Sbjct: 231 FMSHIHNDGDNKPDTILVNGFGR 253
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 289 IYSLFYTCTF 260
I+ LFY CTF
Sbjct: 20 IHPLFYVCTF 29
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 3.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 287 LFSILYLYISKCLSSIIANAAERTPHCTFASICM 186
LF++ Y+Y S +SII F S C+
Sbjct: 153 LFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCI 186
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.0 bits (42), Expect = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 289 IYSLFYTCTF 260
I+ LFY CTF
Sbjct: 20 IHPLFYVCTF 29
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 20.6 bits (41), Expect = 4.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 62 WTFST*LLVLI 30
W+FST LLV+I
Sbjct: 180 WSFSTGLLVMI 190
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 19.8 bits (39), Expect = 6.9
Identities = 7/25 (28%), Positives = 10/25 (40%)
Frame = +1
Query: 40 SSHVLNVQENIMTSNCASSPYSCEA 114
+ H E NC S Y C++
Sbjct: 358 AGHKCTCPEGFYGKNCEFSGYDCDS 382
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 19.4 bits (38), Expect = 9.2
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -3
Query: 72 YIFLDVQHVTAGSY 31
++ ++ H+TAG+Y
Sbjct: 335 HVSANIVHITAGNY 348
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 19.4 bits (38), Expect = 9.2
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -3
Query: 72 YIFLDVQHVTAGSY 31
++ ++ H+TAG+Y
Sbjct: 335 HVSANIVHITAGNY 348
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,675
Number of Sequences: 336
Number of extensions: 1566
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5730534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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