Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i03
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       29   0.10 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   6.7  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 0.10
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 200 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 367
           +QV+PD   S K   ++N F+ND  E       +   +  + ++ R++   +  LL
Sbjct: 45  KQVHPDTGISSKAMSIMNSFVNDIFERIARKSRLAHYNKRSTITSREIQTAVRLLL 100


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 197 CEQVYPDKDFSLKLKR 244
           CE+ YPD  F++ L+R
Sbjct: 222 CEEPYPDIIFNITLRR 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,435
Number of Sequences: 2352
Number of extensions: 7974
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)