BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmnc10i02 (694 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 31 0.21 SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 28 1.5 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 3.4 SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 26 4.5 SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 26 4.5 SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 25 7.9 SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 25 7.9 >SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Schizosaccharomyces pombe|chr 1|||Manual Length = 248 Score = 30.7 bits (66), Expect = 0.21 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 484 GVIEELNKKLAFASESLAEANEKIIHFANALVTANAGL-VQANTMLNEARR 633 G++ KK+ E+ EK+ H + ++ A AGL AN ++N ARR Sbjct: 42 GIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARR 92 >SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 728 Score = 27.9 bits (59), Expect = 1.5 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 334 LITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVL-CTGKYAPAVKMDTNYGVI 492 L+ K+GV+ L+ K KLP++V + ++ + L K+ +D+ Y V+ Sbjct: 542 LLVKDGVVHLVDKVKLPFSVSQKDMIIAGGRKEFLELLDKFEMLDMLDSGYPVV 595 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 26.6 bits (56), Expect = 3.4 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 490 IEELNKKLAFASESLAEANEKIIHFANALVTANAGLVQANTMLNE----ARRETAQLANR 657 IEE K+ FAS S E ++ +ALV+ A L ++ + E + R+ L + Sbjct: 173 IEERKKQHMFASSSSRVKEEILVQEKSALVSDLASLQSDHSKVCEKLEVSSRQVQDLEKK 232 Query: 658 MADIAQ 675 +A +AQ Sbjct: 233 LAGLAQ 238 Score = 25.4 bits (53), Expect = 7.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 466 KMDTNYGVIEELNKKLAFASESLAEANEKI 555 K++ + +++L KKLA ++ E NEKI Sbjct: 218 KLEVSSRQVQDLEKKLAGLAQQNTELNEKI 247 >SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizosaccharomyces pombe|chr 1|||Manual Length = 721 Score = 26.2 bits (55), Expect = 4.5 Identities = 15/58 (25%), Positives = 32/58 (55%) Frame = +1 Query: 100 EDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYSESGSIPYT 273 E +FTL+ ++E G + + DIA +L++++ +Q Y+ Y+ G+ P++ Sbjct: 386 ETSFTLQALVESGLYEKEAFKPDIAKALEFLDRQQIRTQYEGSGYR--YNSLGAWPFS 441 >SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pombe|chr 1|||Manual Length = 264 Score = 26.2 bits (55), Expect = 4.5 Identities = 20/58 (34%), Positives = 27/58 (46%) Frame = +1 Query: 490 IEELNKKLAFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMA 663 IEE KKL +E L++ N + L T N LV+ LN E QL ++A Sbjct: 90 IEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKT---LNSLNSEFLQLLRKIA 144 >SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 376 Score = 25.4 bits (53), Expect = 7.9 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 688 WLSRLAQCPPCGWPAAPFRGAPRL 617 W+SR CP CG P G +L Sbjct: 175 WISRYRFCPGCGKRNIPTMGGTKL 198 >SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1|Schizosaccharomyces pombe|chr 2|||Manual Length = 920 Score = 25.4 bits (53), Expect = 7.9 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -3 Query: 296 LTTLSGAGVYGIDPDSLYVVLYFLS 222 L+ L+ Y +DPD +Y +L FLS Sbjct: 800 LSALASTIGYKLDPDDVYNILSFLS 824 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,657,683 Number of Sequences: 5004 Number of extensions: 51764 Number of successful extensions: 174 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 174 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 321951680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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