Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10i02
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052988-1|AAH52988.1|  980|Homo sapiens retinoic acid induced 1...    30   9.0  
AY317139-1|AAP84319.1|  983|Homo sapiens RAI14 isoform protein.        30   9.0  
AF155135-1|AAF44722.1|  980|Homo sapiens novel retinal pigment e...    30   9.0  
AB037755-1|BAA92572.1|  989|Homo sapiens KIAA1334 protein protein.     30   9.0  

>BC052988-1|AAH52988.1|  980|Homo sapiens retinoic acid induced 14
           protein.
          Length = 980

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 466 KMDTNY-GVIEELNKKLAFASESLAEANEKIIHFANALVT--ANAGLVQANTMLNEARRE 636
           +M ++Y  VIE +NK+ AF  E   EA E+I+   + L +        +A  M     R 
Sbjct: 578 EMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRM 637

Query: 637 TAQLANRMADIAQ 675
             +L  ++++++Q
Sbjct: 638 IDELNKQVSELSQ 650


>AY317139-1|AAP84319.1|  983|Homo sapiens RAI14 isoform protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 466 KMDTNY-GVIEELNKKLAFASESLAEANEKIIHFANALVT--ANAGLVQANTMLNEARRE 636
           +M ++Y  VIE +NK+ AF  E   EA E+I+   + L +        +A  M     R 
Sbjct: 581 EMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRM 640

Query: 637 TAQLANRMADIAQ 675
             +L  ++++++Q
Sbjct: 641 IDELNKQVSELSQ 653


>AF155135-1|AAF44722.1|  980|Homo sapiens novel retinal pigment
           epithelial cell protein protein.
          Length = 980

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 466 KMDTNY-GVIEELNKKLAFASESLAEANEKIIHFANALVT--ANAGLVQANTMLNEARRE 636
           +M ++Y  VIE +NK+ AF  E   EA E+I+   + L +        +A  M     R 
Sbjct: 578 EMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRM 637

Query: 637 TAQLANRMADIAQ 675
             +L  ++++++Q
Sbjct: 638 IDELNKQVSELSQ 650


>AB037755-1|BAA92572.1|  989|Homo sapiens KIAA1334 protein protein.
          Length = 989

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +1

Query: 466 KMDTNY-GVIEELNKKLAFASESLAEANEKIIHFANALVT--ANAGLVQANTMLNEARRE 636
           +M ++Y  VIE +NK+ AF  E   EA E+I+   + L +        +A  M     R 
Sbjct: 587 EMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRM 646

Query: 637 TAQLANRMADIAQ 675
             +L  ++++++Q
Sbjct: 647 IDELNKQVSELSQ 659


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,468,121
Number of Sequences: 237096
Number of extensions: 1985031
Number of successful extensions: 4534
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4534
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)