Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h23
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2204|AAF58051.2| 1419|Drosophila melanogaster CG18243-P...    29   4.7  

>AE013599-2204|AAF58051.2| 1419|Drosophila melanogaster CG18243-PA
            protein.
          Length = 1419

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 141  NIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLKK 269
            N++ ++  +K  E   L D  E+  +HD     +K+ +YY KK
Sbjct: 1199 NVRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKK 1241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,799,308
Number of Sequences: 53049
Number of extensions: 452226
Number of successful extensions: 1318
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)