Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h21
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032126-1|AAH32126.1| 289|Homo sapiens ATP synthase mitochondr... 120 6e-27
BC004114-1|AAH04114.1| 289|Homo sapiens ATP synthase mitochondr... 120 6e-27
AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens ... 36 0.16
X89109-1|CAA61482.1| 461|Homo sapiens coronin homologue protein. 31 4.7
D44497-1|BAA07940.1| 461|Homo sapiens human p57 protein. 31 4.7
BC126387-1|AAI26388.1| 461|Homo sapiens coronin, actin binding ... 31 4.7
BC126385-1|AAI26386.1| 461|Homo sapiens coronin, actin binding ... 31 4.7
BC110374-1|AAI10375.1| 461|Homo sapiens coronin, actin binding ... 31 4.7
AF495470-1|AAM18516.1| 461|Homo sapiens tryptophane aspartate-c... 31 4.7
U34690-1|AAA77058.1| 461|Homo sapiens coronin-like protein prot... 30 8.2
AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein FL... 30 8.2
>BC032126-1|AAH32126.1| 289|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 2 protein.
Length = 289
Score = 120 bits (288), Expect = 6e-27
Identities = 52/130 (40%), Positives = 76/130 (58%)
Frame = +2
Query: 260 YRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVEWDSQNE 439
Y P RKRFY+ ++ Q + +E+ LDHR+L TP + TV +E LA AVA EWDSQ +
Sbjct: 40 YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99
Query: 440 TISQATMHLTALCNTALDNPGKLTSHDIVNYLLEYYPTDTLLFYSXXXXXXXXXXXXKWT 619
TI TMHLT LCNT+LDNP + ++ +++ TDT+ + +W
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWD 159
Query: 620 PILDWFQKTF 649
PI++W +K +
Sbjct: 160 PIIEWAEKRY 169
>BC004114-1|AAH04114.1| 289|Homo sapiens ATP synthase mitochondrial
F1 complex assembly factor 2 protein.
Length = 289
Score = 120 bits (288), Expect = 6e-27
Identities = 52/130 (40%), Positives = 76/130 (58%)
Frame = +2
Query: 260 YRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVEWDSQNE 439
Y P RKRFY+ ++ Q + +E+ LDHR+L TP + TV +E LA AVA EWDSQ +
Sbjct: 40 YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99
Query: 440 TISQATMHLTALCNTALDNPGKLTSHDIVNYLLEYYPTDTLLFYSXXXXXXXXXXXXKWT 619
TI TMHLT LCNT+LDNP + ++ +++ TDT+ + +W
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQRNEWD 159
Query: 620 PILDWFQKTF 649
PI++W +K +
Sbjct: 160 PIIEWAEKRY 169
>AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46412 fis, clone THYMU3011534. ).
Length = 909
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 326 WEVTLDHRRLXTPNGNVLTVGNEPLARAVAVEWDSQNETI--SQATMHLTALCNTALDN 496
W LD+R L P ++LTV ++ +VA++ S I +A +HL+ CNT N
Sbjct: 74 WSCALDYRPLYLPIRSLLTVETFSVSSSVALDKSSSTLRIILDEAALHLSDKCNTVTIN 132
>X89109-1|CAA61482.1| 461|Homo sapiens coronin homologue protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>D44497-1|BAA07940.1| 461|Homo sapiens human p57 protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>BC126387-1|AAI26388.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>BC126385-1|AAI26386.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>BC110374-1|AAI10375.1| 461|Homo sapiens coronin, actin binding
protein, 1A protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>AF495470-1|AAM18516.1| 461|Homo sapiens tryptophane
aspartate-containing coat protein protein.
Length = 461
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>U34690-1|AAA77058.1| 461|Homo sapiens coronin-like protein
protein.
Length = 461
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 192 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSEWQVAL 249
Query: 422 WDSQN 436
WD+++
Sbjct: 250 WDTKH 254
>AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ41407 fis, clone BRHIP2000819, moderately
similar to Human mRNA for actin binding protein p57. ).
Length = 193
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 36 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 93
Query: 422 WDS 430
WD+
Sbjct: 94 WDT 96
>AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein
FLJ41407 variant protein.
Length = 558
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 242 CTLCSIYRPYATRKRFYRGTAVIQNDNKWEVTLDHRRLXTPNGNVLTVGNEPLARAVAVE 421
CT C R R +GT V + D E T R + G +LT G ++
Sbjct: 248 CTSCRDKRVRIIEPR--KGTVVAEKDRPHEGTRPVRAVFVSEGKILTTGFSRMSERQVAL 305
Query: 422 WDS 430
WD+
Sbjct: 306 WDT 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,442,545
Number of Sequences: 237096
Number of extensions: 1943549
Number of successful extensions: 6679
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6676
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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