Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h17
(781 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 29 5.4
U31961-2|AAA84401.1| 515|Drosophila melanogaster protein ( Dros... 29 5.4
BT023197-1|AAY55613.1| 592|Drosophila melanogaster IP03156p pro... 29 5.4
AF433852-1|AAM18003.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433851-1|AAM18002.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433850-1|AAM18001.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433849-1|AAM18000.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433848-1|AAM17999.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433847-1|AAM17998.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433846-1|AAM17997.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433845-1|AAM17996.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433844-1|AAM17995.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AF433843-1|AAM17994.1| 344|Drosophila melanogaster retinoid- an... 29 5.4
AE014297-2276|AAF55366.1| 553|Drosophila melanogaster CG8953-PA... 29 5.4
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 29 5.4
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 1407 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 1465
Query: 631 FKK 639
K
Sbjct: 1466 SPK 1468
>U31961-2|AAA84401.1| 515|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 515
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 367 TKLNFTDYSVKVNKTYPETSDQRDNRLNYEQ-----ALASVARLNYELEQSVTGSGKLHY 531
T+ +F S+K++++ ET RL+ E+ A ++++ +++ G G+L +
Sbjct: 189 TRTSFVWKSLKLDQSERETLMGLKKRLSEEKEIKLRAKTEMSKIRKAMDELCLGKGELQF 248
Query: 532 ADQNRLAYDPAVDTMCA-DPPYLLQGQKNQYHIP---FKKKLIIQ*VYASL 672
QN+ D + DT+ D Q N P F+ +++ +Y SL
Sbjct: 249 GLQNKSETDASKDTLVVIDKALSALSQYNTLKFPDCNFQLSRLMKSLYGSL 299
>BT023197-1|AAY55613.1| 592|Drosophila melanogaster IP03156p
protein.
Length = 592
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 367 TKLNFTDYSVKVNKTYPETSDQRDNRLNYEQ-----ALASVARLNYELEQSVTGSGKLHY 531
T+ +F S+K++++ ET RL+ E+ A ++++ +++ G G+L +
Sbjct: 266 TRTSFVWKSLKLDQSERETLMGLKKRLSEEKEIKLRAKTEMSKIRKAMDELCLGKGELQF 325
Query: 532 ADQNRLAYDPAVDTMCA-DPPYLLQGQKNQYHIP---FKKKLIIQ*VYASL 672
QN+ D + DT+ D Q N P F+ +++ +Y SL
Sbjct: 326 GLQNKSETDASKDTLVVIDKALSALSQYNTLKFPDCNFQLSRLMKSLYGSL 376
>AF433852-1|AAM18003.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433851-1|AAM18002.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433850-1|AAM18001.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433849-1|AAM18000.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433848-1|AAM17999.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433847-1|AAM17998.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433846-1|AAM17997.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433845-1|AAM17996.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433844-1|AAM17995.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AF433843-1|AAM17994.1| 344|Drosophila melanogaster retinoid- and
fatty acid-bindingprotein protein.
Length = 344
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 35 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 93
Query: 631 FKK 639
K
Sbjct: 94 SPK 96
>AE014297-2276|AAF55366.1| 553|Drosophila melanogaster CG8953-PA
protein.
Length = 553
Score = 29.5 bits (63), Expect = 5.4
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Frame = +1
Query: 367 TKLNFTDYSVKVNKTYPETSDQRDNRLNYEQ-----ALASVARLNYELEQSVTGSGKLHY 531
T+ +F S+K++++ ET RL+ E+ A ++++ +++ G G+L +
Sbjct: 227 TRTSFVWKSLKLDQSERETLMGLKKRLSEEKEIKLRAKTEMSKIRKAMDELCLGKGELQF 286
Query: 532 ADQNRLAYDPAVDTMCA-DPPYLLQGQKNQYHIP---FKKKLIIQ*VYASL 672
QN+ D + DT+ D Q N P F+ +++ +Y SL
Sbjct: 287 GLQNKSETDASKDTLVVIDKALSALSQYNTLKFPDCNFQLSRLMKSLYGSL 337
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 451 YEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQGQKNQYHIP 630
+ Q S A+LN ++ +T G+ A + + ++DT+ +P + L+ ++++HI
Sbjct: 1407 HPQDKISFAKLNLIVKNQLTAKGEFRVAKNGKGDFTASIDTLKTEPKHKLE-IESKFHIQ 1465
Query: 631 FKK 639
K
Sbjct: 1466 SPK 1468
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,515,032
Number of Sequences: 53049
Number of extensions: 488716
Number of successful extensions: 1263
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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