Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h17
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical...    28   6.5  
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical...    28   6.5  
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical...    28   6.5  
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct...    28   6.5  
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct...    28   6.5  
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct...    28   6.5  
U41274-2|AAD50512.1|  347|Caenorhabditis elegans Intracellular l...    28   8.6  
AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical ...    28   8.6  

>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19c protein.
          Length = 1131

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 747 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 785


>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19b protein.
          Length = 1118

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 734 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 772


>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19a protein.
          Length = 1140

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 756 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 794


>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1c protein.
          Length = 1131

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 747 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 785


>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1b protein.
          Length = 1118

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 734 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 772


>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1a protein.
          Length = 1140

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 637 F*KEYDIDFSDLVEGKEGRRTWCPLRDRMPICSDRHSVA 521
           F K+++  F D+     G   WCP R+      +RH  A
Sbjct: 756 FSKDFEQQFQDMKYDSTGMFHWCPSRNLEDCVLERHQAA 794


>U41274-2|AAD50512.1|  347|Caenorhabditis elegans Intracellular
           lectin protein 2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 456 LVIQSVVPLVRGLGVGFIHF 397
           LVI  V+ LV GLG GF++F
Sbjct: 316 LVIVGVIVLVGGLGFGFVYF 335


>AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical
           protein C04F5.8 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -1

Query: 622 DIDFSDLVEGKEGRRTWCPL---RDRMPICSDRHSVA 521
           D D  +LVE  E  RT+CP+   RD +P+    HS++
Sbjct: 57  DDDVEELVERDELSRTYCPVCSSRDTVPLNFISHSLS 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,265,277
Number of Sequences: 27780
Number of extensions: 257861
Number of successful extensions: 611
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)