Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h16
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    26   0.24 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.31 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.31 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.41 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.55 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.9  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
 Frame = +1

Query: 256 NVTSFANRIASFSVSFIY----------LGFLIYAFLFLFKVDNTF-IIALNIFI 387
           NV +F N+I  +S+ F++          LGFL+YA    F  + TF II L++F+
Sbjct: 166 NVANF-NKIFGWSLIFLFGRIVLQLLSSLGFLLYASKKQFTFEETFAIIHLSVFV 219


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
 Frame = +1

Query: 340 LFKVDNTFIIALNIFI-CGF----GTLYIWIQCIIT 432
           LFK+DN+ I+ L +FI   F    G LY+ +  I+T
Sbjct: 206 LFKIDNSLILDLLVFITINFVVLLGDLYVTLYIILT 241


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 256 NVTSFANRIASFSVSFIYLGFLIYAFLFLFKVDNTFIIALNIFI 387
           NV S++ ++    V F  LGF +  +  L+ +       L IFI
Sbjct: 339 NVQSYSLQLLHQKVQFSVLGFFVVDYTLLYSIVGAVTTYLVIFI 382


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 295 VSFIYLGFLIYAFLFLFKVDNTFIIALNIFICGFGTLYIWIQCIITTYISTLFYDKFLLL 474
           VS + L F+   F++LF V   +       I  FG  Y   + +I T  ST  Y   L +
Sbjct: 138 VSLLQLVFVFCYFIYLFTVYYIYYSVHEASIINFG--YTLAKFMIFT--STCIYTNLLRI 193

Query: 475 LRQCLAKVSFLI 510
           +    +K++ L+
Sbjct: 194 IEADFSKLNHLL 205


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
 Frame = +1

Query: 286 SFSVSFIYLGFLIYAFLFLFKVDNTFIIALNIFICGFGTLYIWIQCIITTYISTLFYDKF 465
           +F +  ++L FL+  + F+  V   F++ +  F C F    + +  ++  Y     +  F
Sbjct: 119 AFIIFTVHLLFLLCIYYFV--VPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIF 176

Query: 466 LLLLRQCLAKVSF----LIIIVMAIFGTMASTLPAGGSGVIYFCYITTSLCSNLSAAIFC 633
            + L  C A + F    L ++ +  F      LP      IY+ Y +  +   +    +C
Sbjct: 177 TMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPC-----IYYFY-SAFIIFTIHLLFYC 230

Query: 634 VFIL 645
           V I+
Sbjct: 231 VLII 234


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 394 FGTLYIWIQCIITTYISTLFYDKFLLLLRQCLAKVS 501
           F T++   QC +TT +  +   +F++L +Q L K++
Sbjct: 172 FFTVFNVAQCYLTTELVLMLQTRFVILNKQ-LTKIT 206


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 316 FLIYAFLFLFKVDNTFIIALNIFICGFGTL 405
           + IYAF+   K    F  AL IF C  G++
Sbjct: 53  YFIYAFVAPVKCLAFFCTALVIFYCQEGSV 82


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 316 FLIYAFLFLFKVDNTFIIALNIFICGFGTL 405
           + IYAF+   K    F  AL IF C  G++
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFYCQEGSV 315


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 316 FLIYAFLFLFKVDNTFIIALNIFICGFGTL 405
           + IYAF+   K    F  AL IF C  G++
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFYCQEGSV 315


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 175 QCTKKQGQYPRNL 137
           QCT  +G YP N+
Sbjct: 624 QCTVSKGDYPLNI 636


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 83  SFYFQHLLHQFVFKYLKKQI 142
           ++ FQHL H +  +  KKQ+
Sbjct: 351 AWLFQHLTHPYPSEDQKKQL 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,137
Number of Sequences: 336
Number of extensions: 4394
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)