Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h14
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.8  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.7  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   8.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 243 MYTFGTAVIVCDRSFSKAGFGRVRDLDGRPVD 338
           +Y F     V  + F  + F ++R  DGR +D
Sbjct: 252 IYRFNDTAKVFQKIFYSSAFSKLRGWDGRSID 283


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = -2

Query: 344  MIVDGSPVQITYTAETGFTKTPITYNYRGTERVHVEHFEALDRSISDQDLESIITKFLED 165
            +++  + V++TY    G     + Y+   T RV    ++ +DR I       + +   E 
Sbjct: 1692 LVMYDARVKVTYHNRMGRPVQVVVYDDPRTVRVREIIYDEIDRPIMQTKWTKLTSHLKEY 1751

Query: 164  YAIIFGIATDA-GFEMLMSG 108
            +A      T   G   +MSG
Sbjct: 1752 FAFYENFITQVHGTSHVMSG 1771


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 527 ANNVFSELRNFDYRAPSSILPPRPNVDSNA 438
           ANNV      +  + P  + PPR N  S A
Sbjct: 624 ANNVIPPPSAYQQQQPPVVPPPRTNSQSQA 653


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = -2

Query: 239  EHFEALDRSISDQDLESIITKFLEDYAIIFGIATDAGFEMLMSGF 105
            +++ A+ +  S + L++I        AI+F I T+  F+M++  F
Sbjct: 1588 KYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTNKKFDMIIMLF 1632


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 616 YSTAAVRLDGGNRSSDSCWATRFLSLSKCWP 524
           +S   VR++  +R    CW T  +S   C P
Sbjct: 417 WSVCPVRINIPSRRCYRCWQTDHISQDCCGP 447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,575
Number of Sequences: 2352
Number of extensions: 14926
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)