Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h14
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083614-1|BAB89327.1|  302|Homo sapiens putative G-protein coup...    30   6.6  

>AB083614-1|BAB89327.1|  302|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 202 WSLIERSSASKCSTCTRSVPR*LYV-IGVLV-KPVSAVYVIWTGDPSTIMPKSFSVGLL 372
           W L   SS S    CTR+ P  +Y+  G  V  PV  +Y  +   P  + P   S+G+L
Sbjct: 241 WILFLNSSISHTCVCTRTHPHHVYIHNGAAVGSPVGTLYTSF--PPQQLFPTLQSIGIL 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,731,175
Number of Sequences: 237096
Number of extensions: 1945468
Number of successful extensions: 3959
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)