Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h13
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    26   0.95 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   8.8  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   8.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.8  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 542 RRHASAARNVLPPRRRNCCRPSLEKTKPR 628
           R HASA +    PR R+ C  +   T+ R
Sbjct: 67  RMHASARKRAYCPRTRSACAETFPSTRRR 95


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 218 PAPVSAKTQRHVERVVTVAL 277
           P P+  KT  H+E++  + L
Sbjct: 59  PNPLEQKTNAHIEKIFLITL 78


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 142 NTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 234
           N ++   +R  IK+GL + +PVA + RA  R
Sbjct: 370 NMHNLPYLRACIKEGLRMYQPVAGNMRAAGR 400


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 27   DLTVSG*VPSSCRRGLQPLLCDVVKR 104
            +LT+   VP+ C  G Q  +C ++K+
Sbjct: 1107 ELTIHRYVPARCGAGCQDRVCILLKK 1132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,619
Number of Sequences: 2352
Number of extensions: 15098
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)