Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h12
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.029
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 36 0.029
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.029
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 33 0.21
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 33 0.21
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 32 0.36
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 32 0.36
Z69383-10|CAM06587.1| 222|Caenorhabditis elegans Hypothetical p... 32 0.48
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical ... 29 3.4
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 29 4.5
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 5.9
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 5.9
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 5.9
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4176 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 184
A + N +I KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4816 ANVISAGANAIIEKIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 80 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 259
DL +++ A + ANR + F+NE+ A+R AE ++ +N + LA + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 260 DV 265
+
Sbjct: 1362 SI 1363
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 80 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 259
DL +++ A + ANR + F+NE+ A+R AE ++ +N + LA + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 260 DV 265
+
Sbjct: 1362 SI 1363
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 80 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADIAQ 259
DL +++ A + ANR + F+NE+ A+R AE ++ +N + LA + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 260 DV 265
+
Sbjct: 1362 SI 1363
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 32.3 bits (70), Expect = 0.36
Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 41 VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 220
+E+++ D + + Q+L +LAE L NE+ + + +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969
Query: 221 TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 394
T Q++ R+ ++ D + + L L + + + + + +L R+++ +
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029
Query: 395 DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 529
+SD+ P S + LN+ +P + +K N + + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 32.3 bits (70), Expect = 0.36
Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 41 VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 220
+E+++ D + + Q+L +LAE L NE+ + + +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969
Query: 221 TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 394
T Q++ R+ ++ D + + L L + + + + + +L R+++ +
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029
Query: 395 DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 529
+SD+ P S + LN+ +P + +K N + + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 32.3 bits (70), Expect = 0.36
Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 41 VEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRE 220
+E+++ D + + Q+L +LAE L NE+ + + +D + AR E
Sbjct: 2912 IEVESWDKL--VQHAMQRLQELERNLAECQLHLTSSENEIETMKAVEKIHLEDLKIAREE 2969
Query: 221 TAQLANRMADIA--QDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 394
T Q++ R+ ++ D + + L L + + + + + +L R+++ +
Sbjct: 2970 TDQISKRIDEVRLFVDDVNDAAARLLAEDLKLDEHAKGQIEHVNKRYSTLKRAIRIRQAA 3029
Query: 395 DVIFSSDYVPNSMNVLNKVKEAIPRNKFKAKHNRITLLEDYTREE 529
+SD+ P S + LN+ +P + +K N + + T E+
Sbjct: 3030 VRNAASDFGPTSEHFLNQ-SVTLPWQRAISKSNLLPYYIEQTSEK 3073
>Z69383-10|CAM06587.1| 222|Caenorhabditis elegans Hypothetical
protein F13E9.14 protein.
Length = 222
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 53 TNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETA--RQDCENARRETA 226
T +V AK+++L Q +T +L+ SL E I+ D A +Q E R+E
Sbjct: 124 TANVTAKLEELKQNVTSVLTNLSSVLNSL-----ETILENEDQTVAAQKQAIEELRQENP 178
Query: 227 QLANRMADIAQDVIAKP 277
+ + + IAQ+V KP
Sbjct: 179 EEVDALFFIAQEVAPKP 195
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 74 IDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLANRMADI 253
+D+ +K A++ ++ R A E R E + + E +RE LA + DI
Sbjct: 1463 LDEWRRKCEALVAEVEQSQRETRAAATETFRLRNQLEESGEQTEAVKRENKALAQELKDI 1522
Query: 254 AQDV 265
A +
Sbjct: 1523 ADQL 1526
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 56 NDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLA 235
N+ IA+ D L LT + +L A R + ++ + + A+ ++ +ETA
Sbjct: 197 NEAIAQKDSL---LTARHQELEGARREVASMQANLLNVQHERSEAQARVKSMIKETAAQE 253
Query: 236 NRMADIAQDVIAK 274
NR++ + +D+ K
Sbjct: 254 NRISQLMKDIQMK 266
>AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical
protein F09G2.4 protein.
Length = 843
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/78 (35%), Positives = 33/78 (42%)
Frame = +2
Query: 56 NDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRETAQLA 235
ND + K +D L V E L + A RDAE R E ARR+ AQ A
Sbjct: 376 NDGVLKHEDRLISLVVKKRVALEGEE---LLEYKRRKAERDAEETRLRMERARRQ-AQ-A 430
Query: 236 NRMADIAQDVIAKPSNPQ 289
N D D IA P P+
Sbjct: 431 NESDDSDDDDIAAPIVPR 448
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 470 NKFKAKHNRITLLEDYTREELMNVIGSTMTDRQIARMNSLRNAQ*KFLYVVK 625
N + + LL YT EEL+ V G + D QIA +R VVK
Sbjct: 523 NYDQKRRQNFGLLRYYTLEELIEVFGLLLPDVQIAMRRGVRRENMPVSTVVK 574
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 375 RLRPSDRFCGRRNANSLLPTSHTARLWHSCG 283
RL+PS CG RN L P + A ++ S G
Sbjct: 53 RLKPSSEECGLRNTQPLAPITDIAVIFPSLG 83
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/87 (31%), Positives = 37/87 (42%)
Frame = +2
Query: 206 NARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRL 385
N R T ++ VI S+ C A +GN+ F LG S ++L
Sbjct: 45 NDRNSTTNTLTSYENVQNSVICNFSDIN-CRLAAGMRLGNHIFEMAA----LLGMS-RQL 98
Query: 386 GSNDVIFSSDYVPNSMNVLNKVKEAIP 466
+ F D +N+LNKVKEAIP
Sbjct: 99 HRKSLFFVED--KTYLNMLNKVKEAIP 123
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 202
A V+ + DV+A ++ +K+ + LAE + +L E +A RDAET
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496
Query: 203 ENARRETAQLANRM 244
N E + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 202
A V+ + DV+A ++ +K+ + LAE + +L E +A RDAET
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496
Query: 203 ENARRETAQLANRM 244
N E + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 32 APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMIVAR---RDAETARQDC 202
A V+ + DV+A ++ +K+ + LAE + +L E +A RDAET
Sbjct: 1437 AEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVL 1496
Query: 203 ENARRETAQLANRM 244
N E + +++
Sbjct: 1497 SNELSEKKDIVDQL 1510
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 305 AVCDVGNNEFAFLRPQKRSLGRSLKRLGSN-DVIFSSDYVPNSMNVLNKVKEAIP 466
+V D N + PQK + GRS K+ +N + +F P+ + + K P
Sbjct: 111 SVPDSSRNRSVAVSPQKSAKGRSPKKFATNVEKLFEHHSTPSKLTLAKKQSRQSP 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,131,675
Number of Sequences: 27780
Number of extensions: 327523
Number of successful extensions: 984
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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