Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h11
(426 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 128 6e-29
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 117 9e-26
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 71 1e-11
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 66 2e-10
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 60 1e-08
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 55 7e-07
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.012
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 0.61
UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases... 34 1.1
UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2; Pla... 34 1.1
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 2.5
UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas... 33 3.3
UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2; ... 32 4.3
UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1; Helio... 32 5.7
UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3; ... 32 5.7
UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3; D... 32 5.7
UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1; ... 31 9.9
UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_A5TTL1 Cluster: Recombination protein J; n=4; Fusobacte... 31 9.9
UniRef50_Q8IQA0 Cluster: CG32371-PA; n=2; Drosophila melanogaste... 31 9.9
UniRef50_Q4E351 Cluster: Putative uncharacterized protein; n=3; ... 31 9.9
UniRef50_Q5UPT1 Cluster: Putative transcription initiation facto... 31 9.9
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 128 bits (308), Expect = 6e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = -3
Query: 418 LLNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGMSGC 239
+LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+RYCR+CGMSGC
Sbjct: 206 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 117 bits (282), Expect = 9e-26
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = -1
Query: 201 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIY 22
MNGSWIFCMC VYPGGVCNPSFC CV SNHMW+RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 21 VAVVFT 4
VAV+FT
Sbjct: 51 VAVIFT 56
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 70.9 bits (166), Expect = 1e-11
Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 3/58 (5%)
Frame = -3
Query: 418 LLNDKVIY---LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMC 254
+L D++I + +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF++YC++C
Sbjct: 249 ILTDELILFKPINSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIKYCQIC 306
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 66.5 bits (155), Expect = 2e-10
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Frame = -3
Query: 418 LLNDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMC 254
LL+D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+RYC +C
Sbjct: 200 LLSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELC 259
Query: 253 GM 248
M
Sbjct: 260 QM 261
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 60.5 bits (140), Expect = 1e-08
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -3
Query: 385 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGM 248
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+R+C+ CG+
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIRHCKRCGL 296
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 54.8 bits (126), Expect = 7e-07
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = -3
Query: 385 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCG 251
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+++C+ CG
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 42 MVYRRRRRSSTGATYGLT 95
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 0.61
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 240 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 127
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases,
including glyoxylases; n=1; Brevibacterium linens
BL2|Rep: COG0491: Zn-dependent hydrolases, including
glyoxylases - Brevibacterium linens BL2
Length = 255
Score = 34.3 bits (75), Expect = 1.1
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 55 AVVVLQPVPHMV*HAGAVLQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHAT 234
+ VV+ P P M H A L V+ D A V D H+E G++ A EV +A
Sbjct: 28 SAVVIDPGPEMADHCQAFLAEVADRDLTAIVLTHQHAD--HSEMLGSIEQWAPEVPVYAV 85
Query: 235 INSQTFHTSDSSEG 276
+ HT ++G
Sbjct: 86 LERFARHTEPVADG 99
>UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2;
Plasmodium (Vinckeia)|Rep: Putative transcription factor
- Plasmodium yoelii yoelii
Length = 383
Score = 34.3 bits (75), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 409 DKVIYLQNSNKNKLFELSGLSLKSCRHDFVT-VESQTRAGDEIASFLRYCRMC 254
DK + L +N + ++ C HDF+ V QTR+ DE ++ + YC C
Sbjct: 323 DKNVELFKEGENGAYNITYEKCTDCDHDFLYFVNIQTRSADEGSTIIYYCPNC 375
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 2.5
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 109 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 246
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas
atlantica T6c|Rep: NUDIX hydrolase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 271
Score = 32.7 bits (71), Expect = 3.3
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -3
Query: 412 NDKVIYLQNSNKNKLFELSGLSLKSCR----HDFVTVESQTRAGDEIASFLRYCRMCGMS 245
N +V YL + N+L E +GL L R HD + + S ++A FLR R CG
Sbjct: 58 NGQVCYLVDMG-NELIEQAGLQLSHLRSLLLHDEMDIFSVAARAWQVALFLRTHRFCGQC 116
Query: 244 G 242
G
Sbjct: 117 G 117
>UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium avium|Rep: Putative uncharacterized
protein - Mycobacterium paratuberculosis
Length = 201
Score = 32.3 bits (70), Expect = 4.3
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 133 AEARVTDAARV--DLAHTEDPGAVH*QAAEVTEH-ATINSQTFHTSDSSEG 276
A TD AR+ D TEDPGA AA+VT H A + + +D S+G
Sbjct: 37 AATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSAADVSKG 87
>UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1;
Heliothis zea virus 1|Rep: Copine-like protein T2I1.10 -
Heliothis zea virus 1
Length = 241
Score = 31.9 bits (69), Expect = 5.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 337 CRHDFVTVESQTRAGDEIASFLRYCRMC 254
C H F T+E QTR+GDE + C C
Sbjct: 165 CDHVFKTIEQQTRSGDEEITVSNICIKC 192
>UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 193
Score = 31.9 bits (69), Expect = 5.7
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -1
Query: 285 SLRSFATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKN 106
+L +F + VE +AV ++ C GL + + C Y +CN C CV YRLK+
Sbjct: 101 TLENFKPISRVEAMAVITT--CQQAGLMT--TLVHCKEHFY--SICNCCRCCCVPYRLKH 154
Query: 105 GAGV 94
G+
Sbjct: 155 QYGI 158
>UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3;
Drosophila melanogaster|Rep: Putative gustatory receptor
22b - Drosophila melanogaster (Fruit fly)
Length = 386
Score = 31.9 bits (69), Expect = 5.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 281 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 192
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
>UniRef50_UPI000150AA00 Cluster: transcription factor S-II; n=1;
Tetrahymena thermophila SB210|Rep: transcription factor
S-II - Tetrahymena thermophila SB210
Length = 356
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -3
Query: 397 YLQNSNKNKLFELSGLSLKSCRHD--FVTVESQTRAGDEIASFLRYCRMCGMS 245
+ N + +L L G K C+ F+ E QTR+ DE + C CG S
Sbjct: 301 FYNNMRRQRLQGLEGELCKGCKKKTAFLVKELQTRSSDEPMTRFMECNSCGKS 353
>UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Putative
uncharacterized protein - Xanthobacter sp. (strain Py2)
Length = 469
Score = 31.1 bits (67), Expect = 9.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 44 GLSSPSSFFNRCHIWFDTPAPFFSRYHT---QTQKLGLQTP 157
GL + SF +C+IWFD AP R + T +LG++ P
Sbjct: 389 GLVADWSFGGKCNIWFDYEAPDAPRLYKANYSTDELGVRDP 429
>UniRef50_A5TTL1 Cluster: Recombination protein J; n=4;
Fusobacterium nucleatum|Rep: Recombination protein J -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 844
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 330 TIL*QSKAKRGQATKSLRSFATVGCVECLAVNSSVFCNFGGLS 202
TI+ + K G AT S RS + VECL S + +GG S
Sbjct: 371 TIIMEIKENEGIATASCRSIDGLNIVECLNSVSDILVKYGGHS 413
>UniRef50_Q8IQA0 Cluster: CG32371-PA; n=2; Drosophila
melanogaster|Rep: CG32371-PA - Drosophila melanogaster
(Fruit fly)
Length = 294
Score = 31.1 bits (67), Expect = 9.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 154 AARVDLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 330
+A+ DLA TE VH + TE A+ ++ T SEG+ + R + R+ Q R
Sbjct: 199 SAQTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258
>UniRef50_Q4E351 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1710
Score = 31.1 bits (67), Expect = 9.9
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 53 SPSSFFNRCHIWFDTPAPFFSRYHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTL 232
+PSSF + IW TP R L + SHI ++ P I + + +
Sbjct: 1011 TPSSFSSPSSIWTSTPFSETLRVAMGVMALASNSQQALLSHISRVFAPMITREDVMARWM 1070
Query: 233 LLTARHSTHP 262
L R+ HP
Sbjct: 1071 LDKFRNLPHP 1080
>UniRef50_Q5UPT1 Cluster: Putative transcription initiation factor
IIB-like protein; n=1; Acanthamoeba polyphaga
mimivirus|Rep: Putative transcription initiation factor
IIB-like protein - Mimivirus
Length = 461
Score = 31.1 bits (67), Expect = 9.9
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 418 LLNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTR 299
+LN K YL+N +K+K+ EL ++K DF++V S +
Sbjct: 12 ILNTK--YLENGSKHKIIELPKTNIKKLIKDFLSVNSNKK 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,405,849
Number of Sequences: 1657284
Number of extensions: 7164080
Number of successful extensions: 19554
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19551
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -