Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h11
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   1.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   2.6  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   7.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 313 ESQTRAGDEIASFLRYCRMCG 251
           E + R G  IA++L+Y ++CG
Sbjct: 150 EDKHRLGTAIAAYLQYQKICG 170


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 347 FKILQTRFCNSRKPNEGRRRNRFVPSLLSDVWNVW 243
           F+I      N   PN GRRR    P+    ++ VW
Sbjct: 9   FEITDYDLANEFNPNRGRRR----PTKNQQIYGVW 39


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -3

Query: 415 LNDKVIYLQNSNKNKLFELSGL 350
           +N+++IY  ++N ++LFE+  L
Sbjct: 318 INNRIIYGISNNGSELFEIDRL 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,823
Number of Sequences: 2352
Number of extensions: 7649
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)