Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h10
         (507 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GQ90 Cluster: Chitin synthase; n=5; Onchocercidae|Rep...    35   1.2  
UniRef50_Q241T6 Cluster: Glycosyl hydrolases family 38 protein; ...    33   2.8  
UniRef50_Q8IJL5 Cluster: Putative uncharacterized protein; n=2; ...    32   8.6  
UniRef50_A2DSM1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q9GQ90 Cluster: Chitin synthase; n=5; Onchocercidae|Rep:
           Chitin synthase - Dirofilaria immitis (Canine heartworm)
          Length = 1356

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 189 FTIYKYVRLRKCLKLLKYTH*IMFCCRLNSLAFIFLH 79
           + IYKY + RKC  LL +   +M CCR   +A +F H
Sbjct: 122 YRIYKYPKERKCATLLLF---VMECCRSIGIATLFFH 155


>UniRef50_Q241T6 Cluster: Glycosyl hydrolases family 38 protein;
           n=1; Tetrahymena thermophila SB210|Rep: Glycosyl
           hydrolases family 38 protein - Tetrahymena thermophila
           SB210
          Length = 850

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -2

Query: 488 LFQTQN*KT*VNRTQNSSGNHPVI*FLTYSEIGYYNIKQNKNITNI 351
           +F++QN +    R QN     P+I F   S+ G++N K NKN+ NI
Sbjct: 701 VFESQNGQL-SRRVQNELDASPLI-FFAESDKGFFNFKVNKNVNNI 744


>UniRef50_Q8IJL5 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 619

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = -2

Query: 299 HILTSDTGY-ITEISITYI*RLLKNRFSIISNNVN*CSLQSI--NMYGSENVLS 147
           H++T++ GY I  I   ++ R+L+N F II NN N  S  +I   MY   N +S
Sbjct: 246 HVITTNDGYVIVPIHCEWLKRILENFFFIIKNN-NIISYNTITNGMYTINNTIS 298


>UniRef50_A2DSM1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 191

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 398 EIGYYNIKQNKNITNIDPLCFPRTYM 321
           EIGYYNIK+N  I  +D    P+ Y+
Sbjct: 60  EIGYYNIKENDFIVVVDKPSIPKQYI 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,639,393
Number of Sequences: 1657284
Number of extensions: 7641444
Number of successful extensions: 11700
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11700
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)