Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h10
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.3  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 163 EPYIFIDCKLHQFTLLEIIE 222
           +PYI +   + QFTLL I E
Sbjct: 163 KPYIDVVVPITQFTLLSIGE 182


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 163 EPYIFIDCKLHQFTLLEIIE 222
           +PYI +   + QFTLL I E
Sbjct: 163 KPYIDVVVPITQFTLLSIGE 182


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 239 LLKNRFSIISNNVN 198
           +L+N F ++SNN+N
Sbjct: 149 VLRNDFRLMSNNLN 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,876
Number of Sequences: 336
Number of extensions: 2346
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)