Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h10
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052109-1|AAK93533.1|  550|Drosophila melanogaster SD05564p pro...    28   8.3  
AF495536-1|AAM18058.1|  550|Drosophila melanogaster prolyl 4-hyd...    28   8.3  
AE014297-4605|AAF57053.2|  550|Drosophila melanogaster CG31022-P...    28   8.3  

>AY052109-1|AAK93533.1|  550|Drosophila melanogaster SD05564p
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 270 DVTSVRCQYVRCRIEVLHVGSRKTQWIDVSNIFVLFN 380
           D+ S+RC+YV  R+  L +G  K + +      V+++
Sbjct: 316 DLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYH 352


>AF495536-1|AAM18058.1|  550|Drosophila melanogaster prolyl
           4-hydroxylase alpha-relatedprotein PH4[alpha]EFB
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 270 DVTSVRCQYVRCRIEVLHVGSRKTQWIDVSNIFVLFN 380
           D+ S+RC+YV  R+  L +G  K + +      V+++
Sbjct: 316 DLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYH 352


>AE014297-4605|AAF57053.2|  550|Drosophila melanogaster CG31022-PA
           protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 270 DVTSVRCQYVRCRIEVLHVGSRKTQWIDVSNIFVLFN 380
           D+ S+RC+YV  R+  L +G  K + +      V+++
Sbjct: 316 DLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYH 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,080,745
Number of Sequences: 53049
Number of extensions: 364333
Number of successful extensions: 406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)