Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h08
(507 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 248 4e-65
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 243 2e-63
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 206 2e-52
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 197 1e-49
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 193 2e-48
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 181 1e-44
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 171 8e-42
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 163 2e-39
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 162 5e-39
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 128 7e-29
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 123 2e-27
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 101 9e-21
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 101 1e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 100 2e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 95 8e-19
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 90 2e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 87 2e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 83 4e-15
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 81 2e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 80 2e-14
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 76 5e-13
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 72 7e-12
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 71 2e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 65 8e-10
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 54 2e-06
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 51 1e-05
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 50 3e-05
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 49 5e-05
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 5e-04
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 46 7e-04
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 45 9e-04
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 44 0.002
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 44 0.002
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 44 0.002
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 44 0.002
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 44 0.003
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.006
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 42 0.011
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 42 0.011
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 41 0.014
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 41 0.019
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 41 0.019
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 40 0.024
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 40 0.043
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 40 0.043
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 40 0.043
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 39 0.057
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 39 0.057
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 39 0.057
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 39 0.075
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 38 0.13
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 38 0.13
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 38 0.17
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 38 0.17
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 38 0.17
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 38 0.17
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 37 0.23
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 37 0.23
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 37 0.23
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 37 0.30
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 37 0.30
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 36 0.40
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 36 0.53
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 36 0.53
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.53
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 35 0.92
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 35 0.92
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 35 0.92
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 35 1.2
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 33 2.8
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.8
UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellu... 33 2.8
UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14; Bacter... 33 2.8
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 2.8
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 33 3.7
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 3.7
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 4.9
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_A7CUU5 Cluster: Ribosomal protein S17; n=1; Opitutaceae... 32 6.5
UniRef50_Q00UW4 Cluster: 30S RIBOSOMAL PROTEIN S17; n=2; Ostreoc... 32 6.5
UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18; Bacter... 32 6.5
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 8.6
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 8.6
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 8.6
UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22; Alphap... 32 8.6
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 248 bits (608), Expect = 4e-65
Identities = 119/143 (83%), Positives = 127/143 (88%)
Frame = +3
Query: 9 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 188
L K +TEKAFQKQ VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPF
Sbjct: 40 LGFKTPRETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPF 98
Query: 189 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 368
TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEI
Sbjct: 99 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEI 158
Query: 369 GDIVTIGECRPLSKTVRFNVLKV 437
GD+VT+GECRPLSKTVRFNVLKV
Sbjct: 159 GDVVTVGECRPLSKTVRFNVLKV 181
Score = 62.5 bits (145), Expect = 5e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +3
Query: 21 MADQTEKAFQKQATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 149
MADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 243 bits (595), Expect = 2e-63
Identities = 116/145 (80%), Positives = 130/145 (89%), Gaps = 6/145 (4%)
Frame = +3
Query: 21 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 182
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 183 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 362
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 363 EIGDIVTIGECRPLSKTVRFNVLKV 437
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 206 bits (504), Expect = 2e-52
Identities = 94/143 (65%), Positives = 118/143 (82%)
Frame = +3
Query: 9 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 188
+S+++ Q+E+AFQKQ +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPF
Sbjct: 1 MSTELTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPF 60
Query: 189 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 368
TG VSIRG+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++
Sbjct: 61 TGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQV 119
Query: 369 GDIVTIGECRPLSKTVRFNVLKV 437
GDIVT+G+CRP+SKTVRFNV+KV
Sbjct: 120 GDIVTVGQCRPISKTVRFNVVKV 142
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 197 bits (481), Expect = 1e-49
Identities = 90/143 (62%), Positives = 115/143 (80%)
Frame = +3
Query: 9 LSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPF 188
+++++ Q+E+AFQKQ +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPF 57
Query: 189 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 368
G VSIRGRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR +
Sbjct: 58 VGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INE 116
Query: 369 GDIVTIGECRPLSKTVRFNVLKV 437
GD+VT+G+CRPLSKTVRFNVL+V
Sbjct: 117 GDVVTVGQCRPLSKTVRFNVLRV 139
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 193 bits (471), Expect = 2e-48
Identities = 90/139 (64%), Positives = 109/139 (78%), Gaps = 3/139 (2%)
Frame = +3
Query: 30 QTEKAFQKQATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 200
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 201 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 380
S+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIV 153
Query: 381 TIGECRPLSKTVRFNVLKV 437
G+CRPLSKTVRFNVLKV
Sbjct: 154 VCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 181 bits (440), Expect = 1e-44
Identities = 87/141 (61%), Positives = 108/141 (76%), Gaps = 5/141 (3%)
Frame = +3
Query: 30 QTEKAFQKQATVFLNRKG----GMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 197
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 198 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 374
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGD 124
Query: 375 IVTIGECRPLSKTVRFNVLKV 437
VT+GECRPLSKTVRFNVLKV
Sbjct: 125 TVTVGECRPLSKTVRFNVLKV 145
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 171 bits (416), Expect = 8e-42
Identities = 95/168 (56%), Positives = 112/168 (66%), Gaps = 29/168 (17%)
Frame = +3
Query: 21 MADQTEKAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 185
MA+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 186 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 302
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 303 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 163 bits (397), Expect = 2e-39
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = +3
Query: 87 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 266
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 267 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRI 131
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 162 bits (393), Expect = 5e-39
Identities = 73/122 (59%), Positives = 95/122 (77%)
Frame = +3
Query: 72 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 251
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 252 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 431
RTI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVL 123
Query: 432 KV 437
+V
Sbjct: 124 EV 125
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 128 bits (309), Expect = 7e-29
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 39 KAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 218
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 219 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 395
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 396 RPLSKT 413
RPLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 123 bits (297), Expect = 2e-27
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +3
Query: 168 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 347
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 348 CFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 101 bits (242), Expect = 9e-21
Identities = 50/113 (44%), Positives = 68/113 (60%)
Frame = +3
Query: 99 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 278
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 279 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
Y KY R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 101 bits (241), Expect = 1e-20
Identities = 40/88 (45%), Positives = 63/88 (71%)
Frame = +3
Query: 171 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 350
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 351 FRDVEIGDIVTIGECRPLSKTVRFNVLK 434
DV +GD V I ECRPLSKT+ F V++
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 100 bits (239), Expect = 2e-20
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Frame = +3
Query: 6 SLSSKMADQTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK 176
S +S M ++ K F L R+ G K R KN+GLGFKTPREAI+G Y+DK
Sbjct: 6 SSTSAMGNRLRKLFLSSLRSSLARRNLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDK 65
Query: 177 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 290
KCPFTG VSIRGRIL + + +MQ TI++ RDYLH++
Sbjct: 66 KCPFTGTVSIRGRILVWYLPQCEMQSTIIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 95.1 bits (226), Expect = 8e-19
Identities = 46/107 (42%), Positives = 62/107 (57%)
Frame = +3
Query: 114 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 293
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 294 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 434
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = +3
Query: 120 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 299
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 300 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 413
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 90.2 bits (214), Expect = 2e-17
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = +3
Query: 171 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 350
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 351 FRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
V+ GD+V IGE P+SKTV+F VL V
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKFTVLGV 111
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/106 (41%), Positives = 68/106 (64%)
Frame = +3
Query: 114 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 293
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 294 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 431
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 83.0 bits (196), Expect = 4e-15
Identities = 39/107 (36%), Positives = 62/107 (57%)
Frame = +3
Query: 114 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 293
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 294 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 434
KY R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 80.6 bits (190), Expect = 2e-14
Identities = 39/106 (36%), Positives = 66/106 (62%)
Frame = +3
Query: 114 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 293
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 294 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 431
KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 171 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 350
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 351 FRDVEIGDIVTIGECRPLSKTVRFNVL 431
+D++ GD V IGE RPLSKT F VL
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVL 102
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 75.8 bits (178), Expect = 5e-13
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +3
Query: 114 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 290
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 291 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 434
KY R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 72.1 bits (169), Expect = 7e-12
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +3
Query: 171 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 350
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 351 FRDVEIGDIVTIGECRPLSKTVRFNVL 431
V+ GD V + E RPL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 114 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 290
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 291 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 65.3 bits (152), Expect = 8e-10
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3
Query: 324 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKV 71
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 219 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 398
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 399 PLSKTVRFNVLKV 437
PLSKT R+ V+++
Sbjct: 64 PLSKTKRWRVVRI 76
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 393 CRPLSKTVRFNVLK 434
R LSKT F VLK
Sbjct: 62 SRKLSKTKAF-VLK 74
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 50.0 bits (114), Expect = 3e-05
Identities = 34/102 (33%), Positives = 47/102 (46%)
Frame = -2
Query: 437 NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMYGHVPVPFLEPIVFG*VVKVIXXXXX 258
NFQNIES+ F S + NIT + E+ R + ++ V F ++F V++VI
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Query: 257 XXXXXXXXXXAGEDAAADRNVASEGTLLVNVGTLNRLSGSFE 132
G+D +D N SE T VNV T N FE
Sbjct: 120 GTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 49.2 bits (112), Expect = 5e-05
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
++LTGVV KMQ+T+ ++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 387 GECRPLSKTVRFNVLKV 437
E RP+SK RF VL++
Sbjct: 60 IESRPISKRKRFRVLRL 76
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 393 CRPLSKT 413
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 216 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 395
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 396 RPLSKT 413
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 45.6 bits (103), Expect = 7e-04
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +3
Query: 201 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 380
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 381 TIGECRPLSKTVRFNVLKV 437
E +SKT + ++K+
Sbjct: 62 ECAESLKISKTKSWILIKI 80
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 45.2 bits (102), Expect = 9e-04
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +3
Query: 219 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 398
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 399 PLSKTVRFNVLKV 437
PLSKT R+ V+K+
Sbjct: 75 PLSKTKRWVVVKI 87
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 213 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 387 GECRPLSKTVRFNVLKV 437
ECRPLSK F + V
Sbjct: 61 VECRPLSKRKSFRLKSV 77
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +3
Query: 204 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 383
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 384 IGECRPLSKTVRFNVLKV 437
ECRPLSK F++ KV
Sbjct: 64 AIECRPLSKRKSFSLHKV 81
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = +3
Query: 207 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 387 GECRPLSKTVRFNVLKV 437
RPLSKT F + K+
Sbjct: 65 VGTRPLSKTKFFRLEKI 81
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 393 CRPLSKTVRFNVL 431
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +3
Query: 198 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 377
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 378 VTIGECRPLSKTVRFNVLKV 437
+ I ECRP+SK + + K+
Sbjct: 59 IEIVECRPISKGKYWRLSKI 78
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +3
Query: 201 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 380
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 381 TIGECRPLSKT 413
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 405 SKTVRFNVLKV 437
SK R+ V+++
Sbjct: 71 SKEKRWRVVEI 81
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 393 CRPLSKTVRFNVLK 434
RPLSK R+ V++
Sbjct: 67 TRPLSKLKRWRVIE 80
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 41.1 bits (92), Expect = 0.014
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +3
Query: 219 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 398
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 399 PLSKTVRFNVLKV 437
PLSK R+ + +V
Sbjct: 74 PLSKLKRWKLAEV 86
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 40.7 bits (91), Expect = 0.019
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 207 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
+ R + GVV M +++V+ + PKY +F ++ + H + +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAHDAD--NACGVGDRVTI 64
Query: 387 GECRPLSKTVRFNVLKV 437
EC P SK ++++ +
Sbjct: 65 SECTPFSKRKTWSLVSI 81
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 40.7 bits (91), Expect = 0.019
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 393 CRPLSKTVRFNVL 431
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 40.3 bits (90), Expect = 0.024
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 405 SKTVRFNVLKV 437
S+T R+ + ++
Sbjct: 69 SRTKRWRLTEI 79
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 39.5 bits (88), Expect = 0.043
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 210 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 387 GECRPLSKTVRFNVLKV 437
P+S + V +
Sbjct: 82 KSMLPISTMKHYYVRNI 98
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 39.5 bits (88), Expect = 0.043
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 393 CRPLSKTVRFNVLKV 437
RPLS T RF + K+
Sbjct: 66 TRPLSATKRFRIAKI 80
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 39.5 bits (88), Expect = 0.043
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEENIAG--IGDLVRIEE 72
Query: 393 CRPLSKTVRFNVLKV 437
RPLSK + ++++
Sbjct: 73 TRPLSKDKNYRLIEI 87
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 39.1 bits (87), Expect = 0.057
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 225 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 398
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 399 PLSKTVRFNVLKV 437
P+SK VL+V
Sbjct: 75 PISKDKSHRVLRV 87
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 39.1 bits (87), Expect = 0.057
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 389
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 390 ECRPLSKTVRFNVLKV 437
ECRP+SKT F +++V
Sbjct: 76 ECRPISKTKHFRLVEV 91
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 39.1 bits (87), Expect = 0.057
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 387 GECRPLSKTVRFNVLKV 437
ECRP+SKT + V KV
Sbjct: 66 EECRPISKTKSWRVAKV 82
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 38.7 bits (86), Expect = 0.075
Identities = 24/71 (33%), Positives = 33/71 (46%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 405 SKTVRFNVLKV 437
SK R+ + +
Sbjct: 74 SKLKRWRLADI 84
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 37.9 bits (84), Expect = 0.13
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 393 CRPLSKTVRFNVLKV 437
PLSK R+ +++V
Sbjct: 62 SEPLSKLKRWRLVRV 76
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 37.9 bits (84), Expect = 0.13
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 393 CRPLSKTVRFNVL 431
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 37.5 bits (83), Expect = 0.17
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 405 SKTVRFNVLKV 437
S T RF ++K+
Sbjct: 64 SATKRFEIIKI 74
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 37.5 bits (83), Expect = 0.17
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 207 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 377
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 378 VTIGECRPLSKTVRFNVLKV 437
V I +CRP+SKT F V ++
Sbjct: 67 VRIEQCRPISKTKHFAVAEI 86
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 37.5 bits (83), Expect = 0.17
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 174 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 353
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 354 RDVEIGDIVTIGECRPLSKTVRFNVLKV 437
IGD V++ E RPLS T R+ ++++
Sbjct: 105 AG--IGDRVSLMETRPLSATKRWRLVEI 130
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 37.5 bits (83), Expect = 0.17
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 405 SKTVRFNVLKV 437
SKT R+ VL +
Sbjct: 66 SKTKRWVVLDI 76
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 37.1 bits (82), Expect = 0.23
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 207 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 380
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 381 TIGECRPLSKTVRFNVLKV 437
I E RPLSKT R+ + +V
Sbjct: 65 KIRETRPLSKTKRWALAEV 83
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 37.1 bits (82), Expect = 0.23
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 393 CRPLSKTVRF 422
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 37.1 bits (82), Expect = 0.23
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +3
Query: 198 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 377
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 378 VTIGECRPLSKTVRF 422
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.7 bits (81), Expect = 0.30
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 393 CRPLSK 410
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.7 bits (81), Expect = 0.30
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 219 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 398
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 399 PLSKTVRF 422
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 36.3 bits (80), Expect = 0.40
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 393 CRPLSKTVRFNVL 431
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 35.9 bits (79), Expect = 0.53
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +3
Query: 201 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 380
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 381 TIGECRPLSKTVRFNVLKV 437
+ E P+SKT + V+++
Sbjct: 66 LMTEVAPISKTKNWRVVEI 84
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 35.9 bits (79), Expect = 0.53
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 393 CRPLSKTVRFNVLK 434
+P+SK R+ V+K
Sbjct: 62 SKPISKDKRWIVVK 75
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.53
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +3
Query: 141 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 320
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 321 RNMS 332
R S
Sbjct: 159 RGKS 162
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 35.1 bits (77), Expect = 0.92
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = +3
Query: 75 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQR 254
R G +R+D + H N G RE + GT+ K TG S G +TG +
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCH 98
Query: 255 TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 365
++ + + + RHR+ H + D E
Sbjct: 99 MDAQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 35.1 bits (77), Expect = 0.92
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +3
Query: 216 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 395
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 396 RPLSKTVRFNVLKV 437
RP+SKT + ++ V
Sbjct: 71 RPISKTKSWTLVDV 84
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 35.1 bits (77), Expect = 0.92
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
++ G+V KM +T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 393 CRPLSKTVRFNVLKV 437
RPLS T R+ +++V
Sbjct: 83 TRPLSATKRWRIVQV 97
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.7 bits (76), Expect = 1.2
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 393 CRPLSKTVRFNVLKV 437
RP+SKT + V ++
Sbjct: 69 TRPVSKTKAWAVSRL 83
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 33.5 bits (73), Expect = 2.8
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVI--RRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 383
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 384 IGECRPLSKTVRFNVL 431
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 264 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellular
organisms|Rep: 30S ribosomal protein S17 -
Propionibacterium acnes
Length = 90
Score = 33.5 bits (73), Expect = 2.8
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +3
Query: 189 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 368
T + R ++ G+V KM +TI + + P Y + + + H + +
Sbjct: 5 TAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDEN--NEAGM 62
Query: 369 GDIVTIGECRPLSKTVRFNVLKV 437
GD V I E RPLS T R+ ++++
Sbjct: 63 GDRVRIMETRPLSATKRWRLVEI 85
>UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14;
Bacteria|Rep: 30S ribosomal protein S17 - Leptospira
interrogans
Length = 89
Score = 33.5 bits (73), Expect = 2.8
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
G V M +T+VI + PK+ + +R + VH + +GD + E RPL
Sbjct: 16 GRVVSNSMNKTVVILVETRKTHPKFKKIVRRSVRLKVHDEK--NECVVGDKILAIETRPL 73
Query: 405 SKTVRFNVLKV 437
SK R + K+
Sbjct: 74 SKEKRHRLYKI 84
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.5 bits (73), Expect = 2.8
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 219 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 393 CRPLSKTVRF 422
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 33.1 bits (72), Expect = 3.7
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 207 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
R + G+V KM++TIVI Y ++ +R + ++GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 387 GECRPLSKTVRFNVLKV 437
ECRPLS+ R+ + V
Sbjct: 65 EECRPLSRRKRWRLRSV 81
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 33.1 bits (72), Expect = 3.7
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = +3
Query: 36 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 215
+K F T F KGG+ K++ L +K E+I G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 216 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 317
G + M+ T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 63 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 227
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 228 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 314
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.7 bits (71), Expect = 4.9
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +3
Query: 168 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 335
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 336 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 416
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 6.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 36 EKAFQKQATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 215
EK Q + +N K+ +H + G+ + +E+I+ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 216 IL 221
IL
Sbjct: 68 IL 69
>UniRef50_A7CUU5 Cluster: Ribosomal protein S17; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S17 - Opitutaceae
bacterium TAV2
Length = 112
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 392
+ L G V ++I + Y P+Y + R + VH + ++GD V I E
Sbjct: 14 KTLIGTVTSRSGDKSIKVTVPYKVPHPQYRKVINRKTVVHVHDEK--NETKVGDKVEIME 71
Query: 393 CRPLSKTVRFNVLKV 437
RPLS+ R+ +++
Sbjct: 72 TRPLSRLKRWRTIRI 86
>UniRef50_Q00UW4 Cluster: 30S RIBOSOMAL PROTEIN S17; n=2;
Ostreococcus|Rep: 30S RIBOSOMAL PROTEIN S17 -
Ostreococcus tauri
Length = 160
Score = 32.3 bits (70), Expect = 6.5
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +3
Query: 132 FKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV--QKMKMQRTIVIRRDYLHYLPKYNR 305
F T A++ + ++ + L GVV Q + +++ R H PKY +
Sbjct: 26 FTTSTVALKTPTTPARATRATGITAAAQTLEGVVVSQSGAKSKVVLVERKVPH--PKYIK 83
Query: 306 FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 437
+ H ++GD V I CRP+S+ RF + KV
Sbjct: 84 RVNASKKFMFHDEN--DGCKVGDRVEISACRPMSRKKRFQLNKV 125
>UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18;
Bacteria|Rep: 30S ribosomal protein S17 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 138
Score = 32.3 bits (70), Expect = 6.5
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 225 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
G+V +T+ + + L P Y + +R + VH + +GD V I E RPL
Sbjct: 65 GLVVSDAADKTVTVSVETLKEHPMYKKRIRRSKKFLVHDER--NEARVGDTVRIIETRPL 122
Query: 405 SKTVRFNVLKV 437
S+ R+ + +
Sbjct: 123 SRRKRWRLASI 133
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 8.6
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 279 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 404
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 8.6
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 73 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 192
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 8.6
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 207 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 386
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 125
Score = 31.9 bits (69), Expect = 8.6
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 219 LTGVVQK---MKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 389
+ G+V K M T+ + R +H PK + RH+ VH + +GD +
Sbjct: 6 IEGIVTKAGVMAKTVTVTVERRLIH--PKLLKPYIRHKKYLVHDEN--NSLSVGDKIVAS 61
Query: 390 ECRPLSKTVRFNV 428
CRPLS RF +
Sbjct: 62 ACRPLSARKRFTL 74
>UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Silicibacter pomeroyi
Length = 76
Score = 31.9 bits (69), Expect = 8.6
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 213 RILTGVVQKMKMQRTI--VIRRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 383
RIL G V +T+ ++ R + H L K R K++R H ++GD V
Sbjct: 4 RILQGTVTSDANAQTVTVLVERRFTHPVLKKTIRKSKKYR---AHDEK--NAFKVGDTVR 58
Query: 384 IGECRPLSKTVRFNVLK 434
I EC P SKT R+ VL+
Sbjct: 59 IIECAPKSKTKRWEVLE 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,119,584
Number of Sequences: 1657284
Number of extensions: 9160256
Number of successful extensions: 22109
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 21490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22042
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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