Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10h07
(442 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118; ... 72 5e-12
UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18; c... 72 5e-12
UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13; c... 53 3e-06
UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1; Pr... 52 5e-06
UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659; ... 52 5e-06
UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24; c... 51 1e-05
UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3; Me... 50 2e-05
UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6; Co... 47 2e-04
UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78; E... 44 0.002
UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5; Al... 42 0.004
UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1; Pe... 36 0.39
UniRef50_Q8HEV9 Cluster: Cytochrome c oxidase subunit 3; n=4; Co... 36 0.51
UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2; Va... 36 0.51
UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15; P... 34 1.6
UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1; Lo... 33 2.7
UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3; As... 31 8.3
UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5; Eu... 31 8.3
>UniRef50_P14574 Cluster: Cytochrome c oxidase subunit 3; n=118;
Bilateria|Rep: Cytochrome c oxidase subunit 3 - Locusta
migratoria (Migratory locust)
Length = 263
Score = 72.1 bits (169), Expect = 5e-12
Identities = 37/80 (46%), Positives = 43/80 (53%)
Frame = +1
Query: 10 NNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDIS 189
NNNHPFH+VDY P P TGAIG + L +G Q RD+
Sbjct: 5 NNNHPFHMVDYSPWPLTGAIGAMILTSGMTKWFHTFNMNLLMIGMTVIVLTMIQWWRDVV 64
Query: 190 REGTYQGKHTILVNKGLR*G 249
REGT+QG HT LV+KGLR G
Sbjct: 65 REGTFQGLHTKLVSKGLRWG 84
>UniRef50_P34842 Cluster: Cytochrome c oxidase subunit 3; n=18;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Anopheles gambiae (African malaria mosquito)
Length = 262
Score = 72.1 bits (169), Expect = 5e-12
Identities = 38/83 (45%), Positives = 43/83 (51%)
Frame = +1
Query: 1 MKINNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**R 180
M + NHPFHLVDY P P TGAIG +T ++G YQ R
Sbjct: 1 MSTHANHPFHLVDYSPWPLTGAIGAMTTVSGLVQWFHQYTMTLFILGNVITILTMYQWWR 60
Query: 181 DISREGTYQGKHTILVNKGLR*G 249
DISREGT+QG HT V GLR G
Sbjct: 61 DISREGTFQGLHTFPVTIGLRWG 83
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 318 LSPNIEIGRI*PPSRITPFNPFQ 386
LSP IE+G PP I FNPFQ
Sbjct: 107 LSPTIELGMTWPPVGIAAFNPFQ 129
>UniRef50_Q8W9N0 Cluster: Cytochrome c oxidase subunit 3; n=13;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Dugong dugon (Dugong)
Length = 261
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +1
Query: 10 NNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDIS 189
+ H +H+V+ P P TGA+ L + +G YQ RD+
Sbjct: 3 HQTHAYHMVNPSPWPLTGALSALLMTSGLVMWFHYHSTILVLLGLLTNILTMYQWWRDVV 62
Query: 190 REGTYQGKHTILVNKGLR*G 249
REGT+QG HT V KGLR G
Sbjct: 63 REGTFQGHHTPTVQKGLRYG 82
>UniRef50_Q0H2E5 Cluster: Cytochrome c oxidase subunit 3; n=1;
Primeuchroeus sp. M48|Rep: Cytochrome c oxidase subunit
3 - Primeuchroeus sp. M48
Length = 227
Score = 52.0 bits (119), Expect = 5e-06
Identities = 29/81 (35%), Positives = 37/81 (45%)
Frame = +1
Query: 7 INNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDI 186
+N NHPFHLV+ P P AI V+ ++ G Q RD+
Sbjct: 1 MNKNHPFHLVNESPWPIXSAISVMIMLLGSIKWFSMNNPNMLMLGMITTILIMIQWWRDV 60
Query: 187 SREGTYQGKHTILVNKGLR*G 249
RE T QG HT+ V+ GLR G
Sbjct: 61 IRESTLQGLHTMKVSMGLRWG 81
Score = 37.1 bits (82), Expect = 0.17
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3
Query: 318 LSPNIEIGRI*PPSRITPFNPF 383
LSP +EIG I PP ITPFNPF
Sbjct: 105 LSPAVEIGGIWPPKGITPFNPF 126
>UniRef50_P00414 Cluster: Cytochrome c oxidase subunit 3; n=659;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Homo sapiens (Human)
Length = 261
Score = 52.0 bits (119), Expect = 5e-06
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +1
Query: 10 NNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDIS 189
+ +H +H+V P P TGA+ L + +G YQ RD++
Sbjct: 3 HQSHAYHMVKPSPWPLTGALSALLMTSGLAMWFHFHSMTLLMLGLLTNTLTMYQWWRDVT 62
Query: 190 REGTYQGKHTILVNKGLR*G 249
RE TYQG HT V KGLR G
Sbjct: 63 RESTYQGHHTPPVQKGLRYG 82
>UniRef50_O99822 Cluster: Cytochrome c oxidase subunit 3; n=24;
cellular organisms|Rep: Cytochrome c oxidase subunit 3 -
Rhipicephalus sanguineus (Brown dog tick)
Length = 257
Score = 51.2 bits (117), Expect = 1e-05
Identities = 29/77 (37%), Positives = 37/77 (48%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 198
HPFHLV+ P P T +I L+L G ++Q RDISREG
Sbjct: 4 HPFHLVEKSPWPITSSISALSLTLGFVSYFQNLSMYLILLAVLMITISSFQWWRDISREG 63
Query: 199 TYQGKHTILVNKGLR*G 249
++QG HT V GL+ G
Sbjct: 64 SFQGFHTHWVLNGLKMG 80
Score = 36.3 bits (80), Expect = 0.29
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 318 LSPNIEIGRI*PPSRITPFNPFQ 386
LSPNIEIG PP I PFNPF+
Sbjct: 104 LSPNIEIGSQWPPKGIYPFNPFE 126
>UniRef50_Q1AGW8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Metazoa|Rep: Cytochrome c oxidase subunit 3 - Trichoplax
adhaerens
Length = 305
Score = 50.0 bits (114), Expect = 2e-05
Identities = 28/77 (36%), Positives = 35/77 (45%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 198
HP+HLVD P PF GA G +G A RD+ REG
Sbjct: 6 HPYHLVDPSPWPFVGASGAFLFTSGAVILFHYNDYRLALTGLFLIIITASAWWRDVIREG 65
Query: 199 TYQGKHTILVNKGLR*G 249
T+QG HT +V +GL+ G
Sbjct: 66 THQGHHTQVVVRGLKLG 82
>UniRef50_Q402M5 Cluster: Cytochrome c oxidase subunit 3; n=6;
Coelomata|Rep: Cytochrome c oxidase subunit 3 -
Acrochordus granulatus (Rasp-skinned water snake)
Length = 261
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/77 (36%), Positives = 34/77 (44%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 198
H +HLVD P P TGA+G L L +G Q RD+ RE
Sbjct: 6 HQYHLVDPSPWPLTGAMGSLLLASGLALWFHTGTLMILKLGLLTLTLTMVQWWRDVIRES 65
Query: 199 TYQGKHTILVNKGLR*G 249
T+QG HT V K +R G
Sbjct: 66 TFQGHHTKGVQKNMRYG 82
>UniRef50_P18945 Cluster: Cytochrome c oxidase subunit 3; n=78;
Eumetazoa|Rep: Cytochrome c oxidase subunit 3 - Gallus
gallus (Chicken)
Length = 261
Score = 43.6 bits (98), Expect = 0.002
Identities = 26/77 (33%), Positives = 31/77 (40%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 198
H +H+VD P P GA L +G Q RD+ RE
Sbjct: 6 HSYHMVDPSPWPIFGAAAALLTTSGLIMWFHYSSTTLLTMGLLSMLLVMLQWWRDVVRES 65
Query: 199 TYQGKHTILVNKGLR*G 249
T+QG HT V KGLR G
Sbjct: 66 TFQGHHTPTVQKGLRYG 82
>UniRef50_Q697G9 Cluster: Cytochrome c oxidase subunit 3; n=5;
Aleyrodidae|Rep: Cytochrome c oxidase subunit 3 -
Aleurochiton aceris
Length = 261
Score = 42.3 bits (95), Expect = 0.004
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = +1
Query: 13 NNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISR 192
NNH FHLV Y P PF ++ ++ L +Q RD+ R
Sbjct: 4 NNHHFHLVSYSPWPFMMSLNLINLGISVIILIVLKIYSSLAVSVTLMLMMKFQWWRDVVR 63
Query: 193 EGTYQGKHTILVNKGLR*G 249
E Y+G H+I V G+ G
Sbjct: 64 EALYEGFHSISVKTGISMG 82
>UniRef50_Q2FBN9 Cluster: Cytochrome c oxidase subunit 3; n=1;
Pediculus humanus corporis|Rep: Cytochrome c oxidase
subunit 3 - Pediculus humanus corporis (human body
louse)
Length = 273
Score = 35.9 bits (79), Expect = 0.39
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVL--TLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISR 192
HPFHLVD P P + +L +T ++ RD++R
Sbjct: 17 HPFHLVDVSPWPIFLSFSLLFSASMTLCWINGLYSFYILMISIVVSSLIVSFWW-RDVTR 75
Query: 193 EGTYQGKHTILVNKGLR*G 249
E T+QGKHT+ V GLR G
Sbjct: 76 EATFQGKHTMEVIAGLRLG 94
>UniRef50_Q8HEV9 Cluster: Cytochrome c oxidase subunit 3; n=4;
Coelomata|Rep: Cytochrome c oxidase subunit 3 - Cherax
destructor albidus
Length = 44
Score = 35.5 bits (78), Expect = 0.51
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 1 MKINNNHPFHLVDYRP*PFTGAIGVLTLITG 93
M +N+H +HLVD P P TG+I + L +G
Sbjct: 1 MSSHNHHAYHLVDMSPWPLTGSISAMLLTSG 31
>UniRef50_Q8HEI3 Cluster: Cytochrome c oxidase subunit 3; n=2;
Varroa destructor|Rep: Cytochrome c oxidase subunit 3 -
Varroa destructor (honeybee mite)
Length = 263
Score = 35.5 bits (78), Expect = 0.51
Identities = 19/77 (24%), Positives = 29/77 (37%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREG 198
H +H+V+ P P + G T + Y RD+ RE
Sbjct: 4 HSYHMVENSPWPIISSFGAFTFMVSIVCMLHLNNFFFFFFSFFLLILNFYLWWRDVIRES 63
Query: 199 TYQGKHTILVNKGLR*G 249
+G HT +V +GL+ G
Sbjct: 64 LMEGMHTFIVKQGLKMG 80
>UniRef50_A3KCM4 Cluster: Cytochrome c oxidase subunit 3; n=15;
Pectinidae|Rep: Cytochrome c oxidase subunit 3 -
Patinopecten yessoensis (Ezo giant scallop) (Yesso
scallop)
Length = 290
Score = 33.9 bits (74), Expect = 1.6
Identities = 24/76 (31%), Positives = 28/76 (36%)
Frame = +1
Query: 22 PFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISREGT 201
PFH VD P PF + G+ Y DI E T
Sbjct: 5 PFHRVDPSPWPFLTSWGLGVSAISFAQFLHGDSFYWVVAGLCSTVMCIYWWFVDIVTEAT 64
Query: 202 YQGKHTILVNKGLR*G 249
Y GKHTI V +G+R G
Sbjct: 65 YLGKHTIRVQRGIRIG 80
>UniRef50_Q2I6Z0 Cluster: Cytochrome c oxidase subunit 3; n=1;
Lottia digitalis|Rep: Cytochrome c oxidase subunit 3 -
Lottia digitalis (California fingered limpet)
Length = 280
Score = 33.1 bits (72), Expect = 2.7
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +1
Query: 13 NNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDISR 192
N +H V P PF+ A +TG RD+ R
Sbjct: 6 NMTKYHRVQPSPWPFSVAASTAIFLTGMLEWLWNYSLLGLIWGASAMAFGCCLWWRDVIR 65
Query: 193 EGTYQGKHTILVNKGLR*G 249
E T+QGKHT LV + ++ G
Sbjct: 66 EATFQGKHTKLVQRFIKTG 84
>UniRef50_Q9B6D8 Cluster: Cytochrome c oxidase subunit 3; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 3 -
Yarrowia lipolytica (Candida lipolytica)
Length = 268
Score = 31.5 bits (68), Expect = 8.3
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Frame = +1
Query: 19 HPFHLVDYRP*PFTGAIGV----LTLITGXXXXXXXXXXXXXXXXXXXXXXXAYQ**RDI 186
HPFHLV P P + V LTL+ + RDI
Sbjct: 11 HPFHLVAPSPWPILVSFSVMSIMLTLVFNMHGFMHNNYWVVFSAIVAIMTMALWF--RDI 68
Query: 187 SREGTYQGKHTILVNKGLR*G 249
E TY G HT+ V KGL G
Sbjct: 69 ISEATYLGDHTLAVRKGLNIG 89
>UniRef50_Q37374 Cluster: Cytochrome c oxidase subunit 3; n=5;
Eukaryota|Rep: Cytochrome c oxidase subunit 3 -
Acanthamoeba castellanii (Amoeba)
Length = 329
Score = 31.5 bits (68), Expect = 8.3
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Frame = +1
Query: 10 NNNHPFHLVDYRP*PFTGAIGVLTLITGXXXXXXXXXXXXXXXXXXXXXXXA--YQ**RD 183
N H FH+V P P +I L G + RD
Sbjct: 41 NQKHSFHIVTRSPWPLYSSIAALMFTFGLVMHMHNYFYGNLLSLAGFFLILLMMFVWWRD 100
Query: 184 ISREGTYQGKHTILVNKGLR*G 249
+ RE T+ G HT V +GLR G
Sbjct: 101 VIRESTFSGYHTKKVQQGLRLG 122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,735,029
Number of Sequences: 1657284
Number of extensions: 2387446
Number of successful extensions: 3523
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3512
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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