Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h06
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p pro...    33   0.38 
BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p pro...    33   0.50 
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    32   0.87 
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    32   0.87 
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   6.2  
BT022415-1|AAY54831.1|  189|Drosophila melanogaster IP08052p pro...    29   8.1  
AE014297-718|AAF54205.4|  227|Drosophila melanogaster CG18228-PA...    29   8.1  

>BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p
           protein.
          Length = 199

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = +2

Query: 173 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 346
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M  +D
Sbjct: 135 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 188

Query: 347 ERKMSKRKKK 376
           ++K++K+KKK
Sbjct: 189 KKKLNKKKKK 198


>BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p
           protein.
          Length = 258

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 173 EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 346
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M  +D
Sbjct: 195 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 248

Query: 347 ERKMSKRKKK 376
           ++K+ K+KKK
Sbjct: 249 KKKLKKKKKK 258


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 23/93 (24%), Positives = 40/93 (43%)
 Frame = +2

Query: 110 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 289
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 290 FLEKKNINYILNVMPVMQDERKMSKRKKKVINN 388
            + K      L+      D+    + +  ++NN
Sbjct: 512 NMGKSPRTRSLSDGGTQDDDEAEKEAQPDLLNN 544


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
            isoform A protein.
          Length = 1218

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 23/93 (24%), Positives = 40/93 (43%)
 Frame = +2

Query: 110  SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 289
            SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 723  SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 290  FLEKKNINYILNVMPVMQDERKMSKRKKKVINN 388
             + K      L+      D+    + +  ++NN
Sbjct: 783  NMGKSPRTRSLSDGGTQDDDEAEKEAQPDLLNN 815


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 164  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 262
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


>BT022415-1|AAY54831.1|  189|Drosophila melanogaster IP08052p
           protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 281 IVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIK-QPEWPSSPA 457
           I+N  +K+ +N++       +D+  + K  +  ++NN+  L  SWYT ++  P+ P +  
Sbjct: 127 ILNLWQKEAVNFV-----GQRDDVIVVKGARAQLHNNEMKLNASWYTNMQINPDIPDATG 181

Query: 458 MWDLVKN 478
           M +   N
Sbjct: 182 MLEWYNN 188


>AE014297-718|AAF54205.4|  227|Drosophila melanogaster CG18228-PA
           protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 281 IVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIK-QPEWPSSPA 457
           I+N  +K+ +N++       +D+  + K  +  ++NN+  L  SWYT ++  P+ P +  
Sbjct: 165 ILNLWQKEAVNFV-----GQRDDVIVVKGARAQLHNNEMKLNASWYTNMQINPDIPDATG 219

Query: 458 MWDLVKN 478
           M +   N
Sbjct: 220 MLEWYNN 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,125,231
Number of Sequences: 53049
Number of extensions: 703134
Number of successful extensions: 1812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1812
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)