Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10h04
         (363 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...   134   6e-32
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...   134   6e-32
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.               134   6e-32
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.       134   6e-32
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...   134   6e-32
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...   134   6e-32
S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...   132   3e-31
AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37 p...    30   2.5  
AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA seq...    29   3.4  
AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA seq...    29   3.4  
BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open readi...    28   7.8  

>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  134 bits (325), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              MRHLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score =  132 bits (319), Expect = 3e-31
 Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +3

Query: 33  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 212
           MTKGTSSFGKRRNKTHTLCRRCG  +YH+QKS C +CGYPA + R Y+WS KA       
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60

Query: 213 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 311
              M HLKIV RRFR+GF+EG  P P + AVA+S
Sbjct: 61  TGRMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94


>AB007183-1|BAA25842.1|   27|Homo sapiens ribosomal protein L37
           protein.
          Length = 27

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +3

Query: 174 HWSVKAXXXXXXXXXXMRHLKIVRRRF 254
           +WS KA          MRHLKIV RRF
Sbjct: 1   NWSAKAKRRNTTGTGRMRHLKIVYRRF 27


>AL355305-3|CAI14559.1|  436|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 436

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 125 IKMRPMWISCSKITILPLVSEG*AQEDYW 211
           IK RP W  CSK   LP V+E  ++   W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281


>AL355305-2|CAI14560.1|  360|Homo sapiens protein ( Human DNA
           sequence from clone RP11-487F23 on chromosome 6. ).
          Length = 360

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 125 IKMRPMWISCSKITILPLVSEG*AQEDYW 211
           IK RP W  CSK   LP V+E  ++   W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205


>BC033448-1|AAH33448.1|  460|Homo sapiens chromosome 6 open reading
           frame 182 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 125 IKMRPMWISCSKITILPLVSE 187
           IK RP W  CSK   LP V+E
Sbjct: 253 IKRRPPWQICSKFGALPFVAE 273


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,617,581
Number of Sequences: 237096
Number of extensions: 917094
Number of successful extensions: 1856
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)