Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g24
         (713 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313     28   6.4  
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554...    28   8.5  

>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
          Length = 739

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 571 SNCSDSTQTVPGA*RAHIQP--VIGNPITSNYENYSFGVIL 687
           S   ++TQ VP     +I P  ++   +TS  + YSFGVIL
Sbjct: 575 STIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVIL 615


>04_04_1356 +
           32854585-32854832,32854948-32855148,32855270-32855447,
           32856389-32856651,32856800-32857040,32857317-32858456,
           32858856-32858993
          Length = 802

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 669 IIFVITSDRVTYHWLNMSPLCSWNCLSTV 583
           I+F +TSD +TYH +++ P+ +   L  V
Sbjct: 338 IMFDVTSDYITYHLVDLPPVITLGVLGGV 366


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,738,670
Number of Sequences: 37544
Number of extensions: 280582
Number of successful extensions: 534
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)