Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g22
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46970.1 68415.m05867 basic helix-loop-helix (bHLH) protein, ... 31 0.65
At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR) domai... 30 1.5
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide... 29 2.6
At4g28600.1 68417.m04090 calmodulin-binding protein similar to p... 29 2.6
At4g12330.1 68417.m01951 cytochrome P450 family protein contains... 29 2.6
At4g36010.1 68417.m05127 pathogenesis-related thaumatin family p... 28 4.5
At2g17860.1 68415.m02069 pathogenesis-related thaumatin family p... 28 4.5
At2g04080.1 68415.m00391 MATE efflux family protein similar to h... 28 6.0
At1g59520.3 68414.m06686 expressed protein (CW7) 28 6.0
At1g49350.1 68414.m05532 pfkB-type carbohydrate kinase family pr... 28 6.0
At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote... 28 6.0
At2g24810.1 68415.m02968 pathogenesis-related thaumatin family p... 27 7.9
>At2g46970.1 68415.m05867 basic helix-loop-helix (bHLH) protein,
putative similar to PIF3 like basic Helix Loop Helix
protein (PIL1) [Arabidopsis thaliana] GI:22535492;
contains Myc-type, 'helix-loop-helix' dimerization
domain signature, PROSITE:PS00038
Length = 416
Score = 31.1 bits (67), Expect = 0.65
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +1
Query: 169 PEQQSSTETAAVCKNEKLLNKLE----SSSYNKSNMDQLIAI--VNFLE--KKNINYI-- 318
P+ + VC+N ++L K+ + S+ K L+ + + E KKNI +
Sbjct: 24 PKLKDEDYMELVCENGQILAKIRRPKNNGSFQKQRRQSLLDLYETEYSEGFKKNIKILGD 83
Query: 319 LNVMPVMQDERKMSKRKKKVINNNKYILFNS 411
V+PV Q + + K + +NNNK L +S
Sbjct: 84 TQVVPVSQSKPQQDKETNEQMNNNKKKLKSS 114
>At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 546
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 247 YNKSNMDQLIAIVNFLEKKNINYILNVMP-VMQDERKMSKRKKKVINNNKYILFNSWYTK 423
YN S M + ++ LEKKNIN + + + ++S R + +I ++F S YT+
Sbjct: 22 YNGSRMGFIYHLIMALEKKNINVFVGFNGCICEPVERLSNRIESII---VLVIFTSRYTE 78
Query: 424 IK 429
K
Sbjct: 79 SK 80
>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
identical to like heterochromatin protein LHP1
[Arabidopsis thaliana] GI:15625407; contains Pfam
profile PF00385: 'chromo' (CHRromatin Organization
MOdifier)
Length = 445
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 424 IKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGK 534
IK WP + W+ ++N +AD + F+ + K GK
Sbjct: 127 IKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGK 163
>At4g28600.1 68417.m04090 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]
Length = 739
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/95 (20%), Positives = 39/95 (41%)
Frame = +1
Query: 88 VGH*KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMD 267
VG N SS + + +K + N+ E + S + E+ L Y K N++
Sbjct: 48 VGRDYNGSSALSTAESENAKKLDNGNIEEAELSLRETSSLNYEEARALLGRIEYQKGNIE 107
Query: 268 QLIAIVNFLEKKNINYILNVMPVMQDERKMSKRKK 372
+ + ++ I + ++++RK +R K
Sbjct: 108 AALRVFEGIDINGITVKMKTALTVREDRKHRRRSK 142
>At4g12330.1 68417.m01951 cytochrome P450 family protein contains
Pfam profile:PF00067 cytochrome p450
Length = 518
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 217 KLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKM 357
+L+NKLE + +D+++ N +E+K+I + ++ +M++ ++
Sbjct: 332 ELINKLEIMKRAQQELDKVVGKNNIVEEKHITKLPYILSIMKETLRL 378
>At4g36010.1 68417.m05127 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 301
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 185 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCDEDT 57
E CCSG F D CKP + + CP A+ + D+ T
Sbjct: 196 EYCCSGAFGTPDTCKPSEYSQFFKNA----CPRAYSYAYDDGT 234
>At2g17860.1 68415.m02069 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 253
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 185 EDCCSGMFTMFDFCKPLKRPACILDDIFF--*CPTAWQFVCDEDT 57
E CC+G F D C+P + +FF CPTA+ + D+ T
Sbjct: 195 EFCCNGAFGTPDTCQPSEY------SVFFKKTCPTAYSYAYDDGT 233
>At2g04080.1 68415.m00391 MATE efflux family protein similar to
hypothetical protein GB:AAC27412; contains Pfam profile
PF01554: Uncharacterized membrane protein family
Length = 476
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 383 TTINTFCLTVGTLRSSSPSGLVA 451
T++ + CLT+GTL PSG+ A
Sbjct: 287 TSVLSICLTIGTLHYVIPSGVAA 309
>At1g59520.3 68414.m06686 expressed protein (CW7)
Length = 388
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 145 QKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 324
+KS +NM S T T A+C NE L S S + +++ V + +N+ L+
Sbjct: 114 RKSFYLNMIAHTSFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV-YASPSRVNFHLD 172
Query: 325 VMPVMQ 342
M+
Sbjct: 173 SKKAME 178
>At1g49350.1 68414.m05532 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 378
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 190 ETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKMS 360
E +V K++++ + + + N D+LIA+ N L KN+ + P DE K+S
Sbjct: 160 EPVSVTKSQRIASIAKYVTIVSPNQDELIAMANALCAKNLFH-----PFRSDENKLS 211
>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 324
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 443 LVARPCGIW*KTRPNWQILCSFLITLKRWVKKW 541
LVA C I K RP W + FLI + R++ W
Sbjct: 161 LVAPMCKISDKVRPKWPV-DQFLIMISRFLPTW 192
>At2g24810.1 68415.m02968 pathogenesis-related thaumatin family
protein similar to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile PF00314:
Thaumatin family
Length = 193
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 185 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 66
E CC+G F+ + C P K CPTA+ +V D
Sbjct: 139 EYCCTGAFSKPETCPPTKYSKIFKGA----CPTAYSYVYD 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,370,593
Number of Sequences: 28952
Number of extensions: 307451
Number of successful extensions: 828
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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