Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g18
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    25   1.7  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   9.1  

>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 4   IIRKMANTSNITPDIIVNAQINSEDENVLDFIIEDEY-YLKKRGVGAHIIKVASSP 168
           I+  +   S++TP+  +   +++   NV+ ++ + +Y YL+  GV   +      P
Sbjct: 343 ILGDVVEASSLTPNAQLYGSLHNMGHNVIAYVHDPDYRYLEDYGVMGDVTTAMRDP 398


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +1

Query: 67  NSEDENVLDFIIEDEYYLKKRGVGAHIIKVASSPQLRLLYK 189
           N  +E+ +  + E  + +   G+G H++     P L  +YK
Sbjct: 331 NDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYK 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,853
Number of Sequences: 2352
Number of extensions: 8489
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)