Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g18
         (690 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g01560.1 68418.m00071 lectin protein kinase, putative similar...    34   0.10 
At5g01550.1 68418.m00070 lectin protein kinase, putative similar...    33   0.14 
At4g30780.1 68417.m04361 expressed protein hypothetical protein ...    27   8.9  
At1g71220.1 68414.m08219 UDP-glucose:glycoprotein glucosyltransf...    27   8.9  

>At5g01560.1 68418.m00071 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains protein kinase domain,
           Pfam:PF00069; contains legume lectins alpha and beta
           domains, Pfam:PF00138 and Pfam:PF00139
          Length = 691

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +2

Query: 455 KKKTPTLLESISKKISTTETFQRLRNKNLTTLNK-IKYDSELLLHYLY 595
           KK TP  ++ + + ++  E+  RLR+KNL  L    K+ ++LLL Y Y
Sbjct: 392 KKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDY 439


>At5g01550.1 68418.m00070 lectin protein kinase, putative similar to
           receptor lectin kinase 3 [Arabidopsis thaliana]
           gi|4100060|gb|AAD00733; contains protein kinase domain,
           Pfam:PF00069; contains legume lectins alpha and beta
           domains, Pfam:PF00138 and Pfam:PF00139
          Length = 688

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 455 KKKTPTLLESISKKISTTETFQRLRNKNLTTLNK-IKYDSELLLHYLY 595
           KK TP  ++ + + I+  E+  RLR+KNL  L    K  ++LLL Y Y
Sbjct: 391 KKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDY 438


>At4g30780.1 68417.m04361 expressed protein hypothetical protein
           F27D4.1 -  Arabidopsis thaliana,PID:g4115371
          Length = 589

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 440 PLSMSKKKTPTLLESISKKIS 502
           PL +S KK+P+LLE I  KI+
Sbjct: 71  PLGLSLKKSPSLLELIQMKIT 91


>At1g71220.1 68414.m08219 UDP-glucose:glycoprotein
           glucosyltransferase, putative similar to
           UDP-glucose:glycoprotein glucosyltransferase precursor
           GB:Q09332 [SP|Q09332] from Drosophila melanogaster,
           [gi:7670746] and [gi:11346464] from Homo sapiens
          Length = 1673

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +1

Query: 7   IRKMANTSNITPDIIVNAQINSEDENVLDFIIEDEYYLKKRGVGAHIIKVASSPQLRLLY 186
           IRK+  T+ +           S     L+ + ED+ Y + R     I+  A   QLR + 
Sbjct: 442 IRKLLLTTPLPEPDSYRVDFRSVHVTYLNNLEEDDMYKRWRSNINEILMPAFPGQLRYIR 501

Query: 187 KNAYSAVSCGNYSILCNL 240
           KN + AV   + +  C L
Sbjct: 502 KNLFHAVYVIDPATACGL 519


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,772,361
Number of Sequences: 28952
Number of extensions: 178094
Number of successful extensions: 479
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)