Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10g16
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41273-7|AAP68952.1|  237|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U41273-6|AAA82457.2|  404|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical ...    28   5.1  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    28   6.8  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    28   6.8  
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    27   9.0  
U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical p...    27   9.0  
U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical p...    27   9.0  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF026215-8|AAB71317.1|  415|Caenorhabditis elegans Hypothetical ...    27   9.0  

>U41273-7|AAP68952.1|  237|Caenorhabditis elegans Hypothetical
           protein C26B9.1b protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 322 WRGFWIKSMRICCLRTKKRSWPGCAMASKWAIL 420
           W  FWI ++ I  L   K  WP       WA+L
Sbjct: 44  WMTFWILTLTITLLFQSKGGWPVMIWCLVWAVL 76


>U41273-6|AAA82457.2|  404|Caenorhabditis elegans Hypothetical
           protein C26B9.1a protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 322 WRGFWIKSMRICCLRTKKRSWPGCAMASKWAIL 420
           W  FWI ++ I  L   K  WP       WA+L
Sbjct: 211 WMTFWILTLTITLLFQSKGGWPVMIWCLVWAVL 243


>AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical
           protein T22D1.8 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 511 GHAHFYLGYQLSLLHVYVSRGNCNSNARLISPRSR 615
           G  +F   Y+  LL  Y +RGNC+       P +R
Sbjct: 245 GRVYFRKFYESQLLDAYFTRGNCSKTDFYFFPENR 279


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 20/74 (27%), Positives = 28/74 (37%)
 Frame = -1

Query: 433 ASGILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNEGRCGIPDGPGEV 254
           A+G L  P   P     +   W   SKF C ++ S       N  + E  C + +     
Sbjct: 392 ANGQLTCPFSTPHEQ--TGILWQF-SKFECPINTSKIAFICENFGLAESICAVDNIRIHT 448

Query: 253 STSTFSSPRCEKGK 212
           ST  F    C+K K
Sbjct: 449 STDVFFLEACQKDK 462


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 20/74 (27%), Positives = 28/74 (37%)
 Frame = -1

Query: 433 ASGILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNEGRCGIPDGPGEV 254
           A+G L  P   P     +   W   SKF C ++ S       N  + E  C + +     
Sbjct: 500 ANGQLTCPFSTPHEQ--TGILWQF-SKFECPINTSKIAFICENFGLAESICAVDNIRIHT 556

Query: 253 STSTFSSPRCEKGK 212
           ST  F    C+K K
Sbjct: 557 STDVFFLEACQKDK 570


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 554 WRRDSWYPR*KWAWPPHP 501
           WRR  W+ R  W  PP P
Sbjct: 66  WRRPPWHRRPPWGLPPPP 83


>U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical
           protein C17G10.9a protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 427 GILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNE 290
           G LKL T LP++ LA SF    D  +  F+ K    L T+   VNE
Sbjct: 432 GYLKLYTTLPTKKLA-SFMDVDDEHYDSFIGK----LLTYKMIVNE 472


>U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical
           protein C17G10.9b protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 427 GILKLPTCLPSRSLASSFFWSADSKFSCFLSKSLATLATFNCSVNE 290
           G LKL T LP++ LA SF    D  +  F+ K    L T+   VNE
Sbjct: 430 GYLKLYTTLPTKKLA-SFMDVDDEHYDSFIGK----LLTYKMIVNE 470


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -2

Query: 384 PAPFFGPQTANSHAFYPKASPPWRLSIALSMKAVVEFQMGLEKFPLPRFH 235
           P+  F P  + S A  P   PP   S    MK+       +   PL RFH
Sbjct: 291 PSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPLNRFH 340


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -2

Query: 384 PAPFFGPQTANSHAFYPKASPPWRLSIALSMKAVVEFQMGLEKFPLPRFH 235
           P+  F P  + S A  P   PP   S    MK+       +   PL RFH
Sbjct: 293 PSSSFAPSISASPAPAPPPPPPQAASPYPGMKSTATVSANVPFHPLNRFH 342


>AF026215-8|AAB71317.1|  415|Caenorhabditis elegans Hypothetical
           protein F09G2.9 protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +3

Query: 288 PSLTEQLKVAKVARLLDKKHENLLSADQKKELARLRDGKQVGNFKMPDAP 437
           P +TE+ K  +     +KK E +++A++KKE A + + K+    ++P+ P
Sbjct: 119 PVVTEEKKSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKK----EVPETP 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,216,013
Number of Sequences: 27780
Number of extensions: 274576
Number of successful extensions: 922
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)