Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g15
(477 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 128 2e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 128 2e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 128 2e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 128 2e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 128 2e-30
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 127 4e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 127 4e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 127 4e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 127 4e-30
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 127 4e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 127 4e-30
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 127 4e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 127 4e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 127 4e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 127 4e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 127 4e-30
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 127 4e-30
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 126 8e-30
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 114 3e-26
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 101 3e-22
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 81 5e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 1e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 2e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 61 4e-10
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 60 8e-10
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 56 9e-09
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 53 9e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 5e-07
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 50 8e-07
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 50 8e-07
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 47 6e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 6e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 6e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 47 8e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 1e-05
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 46 1e-05
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 46 1e-05
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 46 1e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 45 2e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 45 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 5e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 44 7e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 43 9e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 1e-04
At2g32350.1 68415.m03954 ubiquitin family protein contains INTER... 42 2e-04
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 42 3e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 41 4e-04
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 41 4e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.033
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 33 0.076
At3g01050.1 68416.m00006 expressed protein 33 0.076
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 33 0.076
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.13
At5g12280.1 68418.m01444 hypothetical protein 32 0.17
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 31 0.31
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 31 0.31
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 31 0.40
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 30 0.70
At2g32360.1 68415.m03955 ubiquitin family protein contains INTER... 30 0.70
At2g35360.1 68415.m04335 ubiquitin family protein contains INTER... 30 0.93
At1g24420.1 68414.m03077 transferase family protein similar to d... 29 1.2
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 28 2.8
At4g01150.1 68417.m00153 expressed protein 28 3.8
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 28 3.8
At1g24610.1 68414.m03096 SET domain-containing protein low simil... 28 3.8
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 5.0
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 27 5.0
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 27 6.6
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 6.6
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 27 8.7
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 27 8.7
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 27 8.7
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 27 8.7
At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3) ... 27 8.7
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 128 bits (309), Expect = 2e-30
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGGY 426
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 128 bits (309), Expect = 2e-30
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGGY 426
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 128 bits (309), Expect = 2e-30
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGGY 426
IQKESTLH+VLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGF 229
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 128 bits (309), Expect = 2e-30
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGGY 426
IQKESTLH+VLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGF 305
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 128 bits (309), Expect = 2e-30
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ +LK KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 121 bits (291), Expect = 3e-28
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+ DQQRLIFAGKQ ED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 110 bits (265), Expect = 4e-25
Identities = 49/76 (64%), Positives = 63/76 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKT E E ++T+ ++K KI D EG+P DQ RLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
+Q++STLH++LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 297
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 359 LWPITIFKRNLLFTW 403
LWP T +R+LLFTW
Sbjct: 283 LWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 297
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 359 LWPITIFKRNLLFTW 403
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 297
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 359 LWPITIFKRNLLFTW 403
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 297
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 359 LWPITIFKRNLLFTW 403
LWP T +R+LLFTW
Sbjct: 435 LWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKE 297
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 359 LWPITIFKRNLLFTW 403
LWP T +R+LLFTW
Sbjct: 359 LWPTTTSRRSLLFTW 373
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 89.4 bits (212), Expect = 1e-18
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +1
Query: 202 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 381
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 382 KESTLHMVLRLRGG 423
S LH+VL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 124 bits (298), Expect = 4e-29
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKE +P DQQRLIFAGKQLED +T+ADYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 120 bits (288), Expect = 7e-28
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+AD N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 79.8 bits (188), Expect = 9e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLE 348
MQIF+KTLTGKTIT E E + T+ ++K KI DKEG+P DQQRLIFAGKQLE
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 278
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 93.9 bits (223), Expect = 5e-20
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +1
Query: 202 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 381
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 382 KESTLHMVLRLRGGY 426
S LH+VL LRGG+
Sbjct: 139 GGSVLHLVLALRGGF 153
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 127 bits (306), Expect = 4e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 126 bits (304), Expect = 8e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEGVP DQQRLIFAGKQL+D +T+ADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 116 bits (279), Expect = 8e-27
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF++TLT KTI E E ++T ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 111 bits (266), Expect = 3e-25
Identities = 54/77 (70%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS-KTMADY 372
MQIF+ TLTGKTIT E E ++T+ ++K KI DKE + DQQRLIFAG+QLED T+ADY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 373 NIQKESTLHMVLRLRGG 423
NIQKESTLH+VLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 101 bits (242), Expect = 3e-22
Identities = 46/78 (58%), Positives = 62/78 (79%)
Frame = +1
Query: 190 VKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD 369
+ MQI KTLT KTIT + ++T+ ++K KI D EG+P+DQQRLIF+GK L+D +T+AD
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 370 YNIQKESTLHMVLRLRGG 423
Y+IQK+S LH+ LRLRGG
Sbjct: 61 YSIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 114 bits (274), Expect = 3e-26
Identities = 52/76 (68%), Positives = 66/76 (86%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
+QI+ KTLT KTIT + E ++++ ++K KI +KEG+P+DQQRLIFAGKQLED T+ADYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRLRGG
Sbjct: 63 IQKESTLHLVLRLRGG 78
Score = 113 bits (272), Expect = 6e-26
Identities = 53/76 (69%), Positives = 65/76 (85%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIF++TLTGKTIT E + ++T+ ++K KI DKEG+ QQRLIFAGKQLED +T+ADYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 376 IQKESTLHMVLRLRGG 423
IQKESTLH+VLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
MQIFIKTLTGKTI E E ++T+A++K+KI KEG+ DQQ LIF G+QLED T+ DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 376 IQKESTLHMVLRLR 417
I K+STL++VLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 85.4 bits (202), Expect = 2e-17
Identities = 42/90 (46%), Positives = 57/90 (63%)
Frame = +1
Query: 154 HSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 333
+S Q S + + MQIF+K GK IT E ++T+ +K KI DK G P DQQ L+F
Sbjct: 379 YSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFR 438
Query: 334 GKQLEDSKTMADYNIQKESTLHMVLRLRGG 423
G QL+D +T+ DYNI+ ESTLH+ +R G
Sbjct: 439 GGQLQDGRTLGDYNIRNESTLHLFFHIRHG 468
Score = 83.4 bits (197), Expect = 7e-17
Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQ--QRLIFAGKQLEDSKTMAD 369
MQIF+KTLT K I E E +T+ ++K + DKEG+ QRLIF GK+L+D T+AD
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 370 YNIQKESTLHMVLRLR 417
Y+IQKESTLH+VL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 82.2 bits (194), Expect = 2e-16
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Frame = +1
Query: 196 MQIFIKTL-------TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 354
MQIF+KT T KTIT E E ++T+ ++K KI K G+P+D+QRLIF G+ L S
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 355 KTMADYNIQKESTLHMVLRLRGG 423
+T+ DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
Score = 79.4 bits (187), Expect = 1e-15
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = +1
Query: 196 MQIFIKTL-----TGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 360
M IF+K L TG+ E E ++T+ ++K K+ DKE +P+D RLIFAGK LE +T
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 361 MADYNIQKESTLHMVLRLRGG 423
+A YNIQK STL++V R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 78.6 bits (185), Expect = 2e-15
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAET-----EPAETVADLKQKIADKEGVPVDQQRLIFAGKQL--EDS 354
MQIF+ T +GK T++T E ++T+ ++K KI D+EG+ D QRLIF G++L ED+
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 355 KTMADYNIQKESTLHMVLRLRG 420
+T+ADY I+ STL + LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 101 bits (241), Expect = 3e-22
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M IFIKTLTG+ I E E +T+ ++K KI DK+G+PVDQQRLIF GKQLED T+ADYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 376 IQKESTLHMVLRL 414
IQ +S LH++ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 80.6 bits (190), Expect = 5e-16
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M+I +KTLT K I E E +T+ +K++I +KEG+P QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 376 IQKESTLHMVLRLRGG 423
+++ S LH+VL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
+++ IKTL +T T + ETV K+KIA + GVPV QQRLIF G+ L+D +++Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 376 IQKESTLHMVLR 411
++ TLH+++R
Sbjct: 84 LENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK------------ 339
M IFIKTLTG+T T E + ++T+ +LK K +KEG+PV+QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 340 -QLEDSKTMADYNIQKESTLHMVLRL 414
++ DS D I E T +VLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 61.7 bits (143), Expect = 2e-10
Identities = 36/106 (33%), Positives = 60/106 (56%)
Frame = +1
Query: 79 VEGK*FVVWVSAACCTIPPSVEARAHSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAE 258
V+GK + V+ + TI + Q L + +V M+IF+ T+ KT E + ++
Sbjct: 103 VKGKSINLEVADSSDTIDLKINGEPTRQLVLR-LGPAVLMRIFVSTIKEKTFILEVKGSD 161
Query: 259 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 396
T+ LK I D+ G PVDQQ L G +L+++ T++DYNI+ ++ L
Sbjct: 162 TIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLK 276
M I IKTL GK I E E + DLK
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 187 SVKMQIFIKTLTG-KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 363
S ++QIF++ ++G KTI E +TV L Q+I K +P +QR+I+ GKQL+ ++
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 364 ADYNIQKESTLHMVLRLR 417
Y+I+++++L +V R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 60.1 bits (139), Expect = 8e-10
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +1
Query: 151 AHSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIF 330
A S+QPL+ + V + + ++ G + T TV K+ IA VP +QQRLI+
Sbjct: 5 ADSRQPLT--AEGVAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIY 62
Query: 331 AGKQLEDSKTMADYNIQKESTLHMV 405
G+ L+D +T+ Y +Q + T+HMV
Sbjct: 63 KGRILKDDQTLLSYGLQADHTVHMV 87
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 56.4 bits (130), Expect = 9e-09
Identities = 29/83 (34%), Positives = 45/83 (54%)
Frame = +1
Query: 157 SQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 336
S QP S +V + I + G + +T TV K+ +A VP +QQRLI+ G
Sbjct: 7 SSQPQSGEGEAVAVNI--RCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKG 64
Query: 337 KQLEDSKTMADYNIQKESTLHMV 405
+ L+D +T+ Y +Q + T+HMV
Sbjct: 65 RILKDDQTLLSYGLQADHTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 53.2 bits (122), Expect = 9e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M ++I T TG + + + ETV ++K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 376 IQKESTL 396
I ES L
Sbjct: 61 ILFESRL 67
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV--PVDQQRLIFAGKQLEDSKTMAD 369
M+IF+KTL+G E +PA+ V+D+K I +G P +Q LI GK L+D T+ +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 370 YNIQKESTLHMVL 408
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 5e-07
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK---QLEDSKTMA 366
MQ+FI GK E E T+AD+K KI D G+ Q L GK ++ TM
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 367 DYNIQKESTLHMVLRLRGG 423
DY I+ HM R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 50.0 bits (114), Expect = 8e-07
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M + I T TG + + + ETV +K+KI +G+PV +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 376 IQKESTL 396
I ES L
Sbjct: 61 ILFESLL 67
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 50.0 bits (114), Expect = 8e-07
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 184 NSVKMQIFIKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 360
+S +Q F++ L GK++T + P +KQ+I ++ +P QRLI G Q+ D
Sbjct: 5 SSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSA 64
Query: 361 MADYNIQKESTLHMVLRLRGG 423
++ Q ++T+++VL LRGG
Sbjct: 65 IS----QPDATVNLVLSLRGG 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAE-TEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 372
+Q F++ L GK++T + P +KQ+I ++ +P QRLI G Q+ + ++
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 373 NIQKESTLHMVLRLRGG 423
Q ++T+++VL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 366
M+IF+KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 367 DYNIQKESTLHMVL 408
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV---PVDQQRLIFAGKQLEDSKTMA 366
M+IF+KTL G E +P ++V D+K+ I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 367 DYNIQKESTLHMVL 408
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 46.8 bits (106), Expect = 8e-06
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 187 SVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-EDSKTM 363
SVK + +++G T+ ++++A++K +I G V +Q+L+F+G++L ++ +
Sbjct: 31 SVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRV 90
Query: 364 ADYNIQKESTLHMVLRL 414
DY + S LH+VL+L
Sbjct: 91 KDYGVTGGSVLHLVLKL 107
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 202 IFIKTLTGKTITAETEPAETVADLKQKIADK-EGVP-VDQQRLIFAGKQLEDSKTMADYN 375
+ + T GK + V LK++I+ + +G P VD Q ++F G++L+D++ +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 376 IQKESTLHMVLR 411
S +H++++
Sbjct: 173 KDGNSVIHLLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV-PVDQQRLIFAGKQLEDSKTMADY 372
++I IK L T T E V DLKQ I GV P Q RL+F G+ L++ + ++DY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 373 NIQKESTLHMV 405
++++ TL++V
Sbjct: 71 HVEEGHTLYLV 81
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 196 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 366
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 367 DYNIQKESTLHMVLR 411
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 196 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 366
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 367 DYNIQKESTLHMVLR 411
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 196 MQIFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMA 366
M ++I+ KT + +P ETV D+KQK+ PV+ QRL+ + LEDSK++A
Sbjct: 1 MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60
Query: 367 DYNIQKESTLHMVLR 411
D ++ ++ + + L+
Sbjct: 61 DQKVENDAVVALTLK 75
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 214 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 390
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 391 TLHMVLRL 414
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 208 IKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQ 381
+KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 382 KESTLHMVLR 411
+S LH+++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 214 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKES 390
TL G I ++++ +K +I G V Q+L+F G++L S + M DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 391 TLHMVLRL 414
LH+VL+L
Sbjct: 100 ILHLVLKL 107
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 208 IKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQ 381
+KT GK E + +K++I+ K G V D+Q +++ G++LED + D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 382 KESTLHMVLR 411
+S LH+++R
Sbjct: 175 DDSVLHLLVR 184
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
M +F +T +G T E +TV ++KQKI + +PV +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 43.6 bits (98), Expect = 7e-05
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 372
M+I +K+L GK E+V+ L+ K + K + + ++ + GK+L+D K++A
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 373 NIQKESTLHMV 405
N+Q S +H++
Sbjct: 721 NVQPNSLVHLI 731
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 43.2 bits (97), Expect = 9e-05
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M++ ++ +G T + + +TV K+KI + +PV +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 376 IQKESTLHM 402
I + LH+
Sbjct: 61 ILQNPLLHL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 372
M+I + L GK E+V+ LK K + K + + ++ + GK+LED K++A+
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 373 NIQKESTLHMV 405
N+Q S +H++
Sbjct: 560 NVQPNSLVHLL 570
>At2g32350.1 68415.m03954 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 233
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 172 SFISNSV-KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL- 345
SFI +V K+ + +K K T E + ETV+ LK KI E P+ + +L ++G +L
Sbjct: 66 SFIHAAVRKIHVTVK-FPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELA 124
Query: 346 EDSKTMADYNIQKESTLHMVLR 411
+D + + +Y I + S + + L+
Sbjct: 125 DDYRNLNEYGITEFSEIVVFLK 146
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +1
Query: 253 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 423
+E V LK+KIA + +P ++Q+L L+D+ ++A YN+ L + LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1
Query: 172 SFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
S +S + + I+ +G + T + +TV +K+KI +G PV +Q LIF K L+D
Sbjct: 28 SSVSIDTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 87
Query: 352 SKTMADYNIQKESTL 396
M I+ S +
Sbjct: 88 HLNMFGCQIRHNSRI 102
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/71 (25%), Positives = 41/71 (57%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
M+I + T + IT + + ETV ++K + + VP+ QQ+L++ G ++ +S ++
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 376 IQKESTLHMVL 408
++ + L M++
Sbjct: 61 VKDDDLLMMMV 71
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
+++ I+ +G + T + +TV +K+KI +G PV +Q LIF K L+D M
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 376 IQKESTL 396
I+ S +
Sbjct: 62 IRHNSRI 68
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
M +F +T +G E +T+ ++K+KI + +PV +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 34.7 bits (76), Expect = 0.033
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 336
M+ ++ L G + E E +T+ +KQKI + VPV +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 33.5 bits (73), Expect = 0.076
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 336
M+ ++ L G + E + +T+ +KQKI + +PV +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At3g01050.1 68416.m00006 expressed protein
Length = 117
Score = 33.5 bits (73), Expect = 0.076
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Frame = +1
Query: 193 KMQIFIKTLTGKTITAETEP-AETVADLKQKIA-----DKEGVP--VDQQRLIFAGKQLE 348
+++I + G I + P A TV+ LK+ + +KE P V + +LI AGK LE
Sbjct: 7 QLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLE 66
Query: 349 DSKTMADY 372
+SKT+ DY
Sbjct: 67 NSKTVKDY 74
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 33.5 bits (73), Expect = 0.076
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 223 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 402
GK+I P TV DLK ++ V Q+LIF GK L ++ T+ ++ + L +
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 403 V 405
+
Sbjct: 604 M 604
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.13
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 208 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
+ T++ + + T +LK IA G+ +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 253 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 378
+E VA LK+KI+ + P ++Q+L L+D+ ++A YN+
Sbjct: 367 SENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQ 318
M IF+ TL GKT E + +E + +K I D + PV +Q
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHD-QVPPVKKQ 88
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLK 276
M+I IKT GKTI E E + D+K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 247 EPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
E T +LK ++ G+ QQRL+F GK+ ED
Sbjct: 86 EATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At2g32360.1 68415.m03955 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 175
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +1
Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL-------EDS 354
M++ ++ +TG I + TV +K+KIA + +PV + L+ ++ ED
Sbjct: 1 MKVSVEIITGTFIDTDVSEDATVKQMKEKIAVEVKLPVTRLILVIGDEETRRLVMEDEDD 60
Query: 355 KTMADYNIQKESTLHMVLR 411
+ D + ++S +++ +
Sbjct: 61 MMLRDLGVGEDSHIYLFFK 79
>At2g35360.1 68415.m04335 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 225
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 262 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSK 357
+ DL+ IA+K PV R+I GK L+D +
Sbjct: 41 IRDLRNAIAEKGKFPVSTLRMILRGKALQDEE 72
>At1g24420.1 68414.m03077 transferase family protein similar to
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034],
acetyl-CoA:benzylalcohol acetyltranferase [Clarkia
concinna][GI:6166330][PMID:10588064]
Length = 436
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 2 KSFESIYRFLH-VGLIIFDYGRGNQLPLKGNNSWC 103
KS I+ L +G + YGRGN++ L +NSWC
Sbjct: 333 KSSSRIFELLEEIGKV---YGRGNEMDLWMSNSWC 364
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 256 ETVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
+TV ++KQKI + + V +Q L F G L+D
Sbjct: 78 DTVLEIKQKIEKYQRILVYRQTLFFQGNVLQD 109
>At4g01150.1 68417.m00153 expressed protein
Length = 164
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 106 VSAACCTIP---PSVEARAHSQQPLSFIS-NSVKMQIFIKTLTGKTITAETEPAETVADL 273
VS C +P P R+ PL +S N ++ +KT T+ + E + DL
Sbjct: 21 VSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEETSSIDTNELITDL 80
Query: 274 KQK 282
K+K
Sbjct: 81 KEK 83
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +1
Query: 193 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT 360
+ ++F++T TG + E + ++ +K+K+ P+++ L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g24610.1 68414.m03096 SET domain-containing protein low
similarity to SP|Q43088 Ribulose-1,5 bisphosphate
carboxylase/oxygenase large subunit N-
methyltransferase, chloroplast precursor (EC 2.1.1.127)
{Pisum sativum}; contains Pfam profile PF00856: SET
domain
Length = 476
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 157 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIK 50
+VP+ P++++CN P RII Q S ++K
Sbjct: 229 DVPMMLPLIDMCNHSFKPNARIIQEQNGADSNTLVK 264
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 154 VPLPPPMVELCNRR-PIPTPRIISLQRQLISTP 59
VPLPPP L RR P+P P L R+ P
Sbjct: 13 VPLPPPPPPLMRRRAPLPPPPPPPLMRRRAPPP 45
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 259 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 351
T+ L+ ++A + G+ + +LIFAGK L+D
Sbjct: 22 TLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 238 AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 417
+ETE VAD + K KE D + + + + S N K + V+R+R
Sbjct: 774 SETENMNKVADTEPKAEGKENSRDDDELADASDSETKSSPKRVRKNKWKPEEIKKVIRMR 833
Query: 418 G 420
G
Sbjct: 834 G 834
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -1
Query: 405 HHVKSRFLLNIVIGHSFGIFQL--------FARKDKSLLIYGHTFFIGNFLLEI 268
H K +L IV+ F IFQ F ++++SL IYG ++F+ F+L I
Sbjct: 1760 HSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFILLI 1813
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 197 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 27
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g44110.1 68416.m04727 DNAJ heat shock protein, putative (J3)
identical to AtJ3 [Arabidopsis thaliana] GI:2641638,
strong similarity to several plant DnaJ proteins from
PGR; contains Pfam profiles PF00226 DnaJ domain, PF00684
DnaJ central domain (4 repeats), PF01556 DnaJ C terminal
region
Length = 420
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +1
Query: 160 QQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 339
+ LS Q + L G+++ ++ P E V K EG+P+ QR GK
Sbjct: 275 EHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPI-YQRPFMKGK 333
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,613,976
Number of Sequences: 28952
Number of extensions: 230653
Number of successful extensions: 825
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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