Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g14
(249 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 28 1.0
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical pr... 26 3.1
U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protei... 26 3.1
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 26 4.1
AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical ... 26 4.1
Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical pr... 25 5.4
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 25 5.4
U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical pr... 25 5.4
U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 25 5.4
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 25 7.1
Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical pr... 25 9.4
AC024791-34|AAF60670.2| 440|Caenorhabditis elegans Hypothetical... 25 9.4
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 163 KNEHSSDKPVDRDLNIAYLASSCSKVRPFRFYHQTQNCDRLN 38
K+EH KP + + + +S + R Y +T++C R N
Sbjct: 16 KSEHFVRKPYESEAGRHVITNSFCSICEVRTYRETKHCKRCN 57
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +1
Query: 10 VVPHTLCGAGSNDRNSVFGDKSG-MDEPLNNWKPDTLYLNLYQPVYRMNVHFCPTAI-HE 183
++ H +D SV D S +DEP+ P + L +YRM F P H
Sbjct: 411 ILDHDDVDVEEDDDESVASDNSSFVDEPVERPPPPRMTLGEAVTIYRMIEVFSPRHFRHG 470
Query: 184 PSYFEVFITKSNWGS 228
P F + +N S
Sbjct: 471 PDSFSLPHNHANLNS 485
>Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical
protein F11A6.1b protein.
Length = 760
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 187 WARVWPLDKNEHSSDKPVDRDLNI 116
W +W L++ EH SD D N+
Sbjct: 179 WTDMWYLNRGEHHSDSTTRMDHNV 202
>Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical
protein F11A6.1a protein.
Length = 692
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 187 WARVWPLDKNEHSSDKPVDRDLNI 116
W +W L++ EH SD D N+
Sbjct: 179 WTDMWYLNRGEHHSDSTTRMDHNV 202
>U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protein
protein.
Length = 692
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 187 WARVWPLDKNEHSSDKPVDRDLNI 116
W +W L++ EH SD D N+
Sbjct: 179 WTDMWYLNRGEHHSDSTTRMDHNV 202
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 118 YLNLYQPVYRMNVHFCPTAIHEPSYFEVF 204
YLN+Y P +++ PT++ E E+F
Sbjct: 368 YLNIYPPCATLHLSNIPTSVSEEKLKEMF 396
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 118 YLNLYQPVYRMNVHFCPTAIHEPSYFEVF 204
YLN+Y P +++ PT++ E E+F
Sbjct: 530 YLNIYPPCATLHLSNIPTSVSEEKLKEMF 558
>AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical
protein T08E11.4 protein.
Length = 704
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 95 FKGSSIPLLSPNTELRSFEPAPQSVCGTT 9
++ S P L+P+T++ + P QS GT+
Sbjct: 153 YRSSQYPFLNPSTKVTTTPPIQQSHLGTS 181
>Z81564-9|CAB04575.1| 724|Caenorhabditis elegans Hypothetical
protein K05C4.9 protein.
Length = 724
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 1 VLRVVPHTLCGAGSNDRNSVFGDKSGMDEPLNNWKPDTLYL 123
+LR++ + A ++ N + + + + N WK D LYL
Sbjct: 575 ILRILKRLVVCANASFENFIEFNVKYLKKTFNKWKSDRLYL 615
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +1
Query: 73 SGMDEPLNNWKPDTLYLNLY----QPVYRMNVHFCPTAIHEPSYFEV 201
S +D NW+ D ++NLY +P+++ + +++ F V
Sbjct: 70 SQLDRMDRNWRSDPYWMNLYPRWAEPIFKEGIDVNSNVVNDDRRFAV 116
>U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical
protein F14B8.5a protein.
Length = 537
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 160 NEHSSDKPVDRDLNIAYLASSCSKVRPFRFYHQTQNCDRL 41
++H SD+P+ + +S+ +K +P HQTQN + L
Sbjct: 443 SDHGSDQPL---ITNEEWSSTTAKRKPVGILHQTQNQNHL 479
>U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical
protein F14B8.5b protein.
Length = 501
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 160 NEHSSDKPVDRDLNIAYLASSCSKVRPFRFYHQTQNCDRL 41
++H SD+P+ + +S+ +K +P HQTQN + L
Sbjct: 407 SDHGSDQPL---ITNEEWSSTTAKRKPVGILHQTQNQNHL 443
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/13 (76%), Positives = 11/13 (84%), Gaps = 1/13 (7%)
Frame = +1
Query: 88 PLN-NWKPDTLYL 123
PLN NWKPD +YL
Sbjct: 49 PLNENWKPDVVYL 61
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 49 RNSVFGDKSGMDEPLNNWKPDTLYLNLYQP 138
+ + +K+ + E LNN+KP L++ QP
Sbjct: 60 QEEIIDEKNKIVETLNNFKPSYKQLSIEQP 89
>Z83102-5|CAB05468.1| 179|Caenorhabditis elegans Hypothetical
protein C54C8.6 protein.
Length = 179
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 124 NLYQPVYRMNVHFCPTAIHEPSYFEVFITKSNWGSSQSNN 243
N+YQ + + F H S + F ++SNW S +NN
Sbjct: 78 NVYQGLKSAQIKFSHITQHGISV-QFFTSQSNWHSITNNN 116
>AC024791-34|AAF60670.2| 440|Caenorhabditis elegans Hypothetical
protein Y47G6A.25 protein.
Length = 440
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 202 TLQNSWARVWPLDKNEHSSDKPVDRDLNIAYLASSCSKV 86
++ NS + +WP S D+ + NIA S+C +
Sbjct: 11 SMSNSMSSLWPAPIEMDSIDEGTENVANIASRWSTCCNI 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,388,367
Number of Sequences: 27780
Number of extensions: 117903
Number of successful extensions: 318
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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