Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10g11
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0274 - 20293963-20294065,20294501-20294560,20295006-202950... 35 0.053
11_06_0284 + 21909758-21913645 34 0.12
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289... 31 0.86
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 1.1
01_06_1009 + 33796450-33796824,33796926-33796970,33797069-337971... 31 1.1
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 30 1.5
04_04_1367 - 32974757-32975499,32975957-32976179 30 1.5
01_05_0781 + 25140652-25142010 30 1.5
07_01_0463 + 3502708-3503535 30 2.0
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 30 2.0
03_02_0109 + 5671418-5671631,5675610-5675690,5676249-5676340,567... 30 2.0
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 30 2.0
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 29 2.6
11_06_0291 + 22008412-22012284 29 3.5
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 3.5
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 29 4.6
03_05_0111 - 20919291-20919439,20920128-20920237,20920341-209204... 29 4.6
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 6.1
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 28 6.1
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 28 6.1
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 28 8.0
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 28 8.0
05_06_0076 + 25381814-25381880,25382927-25382967,25383398-253835... 28 8.0
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 8.0
>01_05_0274 -
20293963-20294065,20294501-20294560,20295006-20295052,
20296065-20296155,20296276-20296427,20296891-20297049,
20297132-20297381,20298255-20298317,20298394-20298566
Length = 365
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -3
Query: 377 SVFTFFHHIIHIRSFVLVFFVLERYKAILLTFRSS 273
SVF F+ H+I I V V FVLER A LTF+ S
Sbjct: 35 SVFVFYRHVIAILFLVPVAFVLERKTAPPLTFKVS 69
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 312 QNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK-REKQVKEKGV 488
+ E+NE E N + KE++ + ++ GG E+ E E+ +K +E++ KE+G
Sbjct: 436 EEEKNEGEEENGEEEGKEKELKGRKDKEKKEKGGREERKEEEHHEKQEKEKEEERKEEG- 494
Query: 489 HNSTQEEKK 515
N +E +K
Sbjct: 495 QNEEKEGRK 503
>05_07_0063 -
27428056-27428184,27428321-27428460,27428698-27428926,
27429231-27429281,27429411-27429636,27430230-27430300,
27430466-27430585,27430671-27430865,27431088-27431152,
27431232-27431322,27431607-27431707,27431767-27431817,
27432076-27432177,27432406-27432510,27432600-27432663,
27433023-27433151
Length = 622
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +3
Query: 285 RKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKRE 464
R Q + I N +D NVD + R+ R++ TP Y E L + + K
Sbjct: 244 RLQQQWIGVVNRSQQDINKNVDMIAARRREREYFSTTPEYKHLAHRMGSEHLAKSLSKHL 303
Query: 465 KQV 473
+ V
Sbjct: 304 ETV 306
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +3
Query: 153 NVHRLEGTSGDTPGGLIIRQ--KDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEEN 326
N + T D+P L + Q KD+ AD Q LDKL + R++ + + Q
Sbjct: 2833 NFEKALETHSDSPN-LHVNQDKKDETADNQTVVDHNTVLDKLEDSNRQEEQETAAQKLPK 2891
Query: 327 EDEGTNVDNVVKERKYRKHN-EETPTYTGGISEQARERLIERMQKREKQVKEKGVH 491
E EG + E ++ N ET G ++ + + E + + QV+E+G++
Sbjct: 2892 ETEGNQEFMAITEPVIKEENVHET---VEGNTQAVKIKSNEEKELFDSQVQERGLN 2944
>01_06_1009 +
33796450-33796824,33796926-33796970,33797069-33797182,
33797679-33797759,33798038-33798211,33798353-33798438,
33799157-33799901
Length = 539
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 207 RQKDKPADFQFAKPSLLGLDKLAAAKRKQ---NRLISFQNEENEDEGTNVDNVV 359
++K KP +AK + G+D AAKR + +EE ED+ T V + V
Sbjct: 210 KKKSKPGKSVYAKATDTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAV 263
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 645 YPYLYCPHPYLASYLYPDSFCSHCSFY 565
Y L C HPY Y P C+HC+F+
Sbjct: 409 YGMLQC-HPYPHEYADPSRQCAHCAFF 434
>04_04_1367 - 32974757-32975499,32975957-32976179
Length = 321
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 681 YHDLFYLCHFYFYP--YLYCPHPYLASYLYPDSFCSH-CSFYRVCDNDDNNHH 532
+H L +LCH YF P L H Y Y SF S ++R+ +NN H
Sbjct: 101 FHHLLHLCHIYFQPSQKLEEDHNYKFVPQYIHSFLSFGRKYFRINYYLENNRH 153
>01_05_0781 + 25140652-25142010
Length = 452
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 GLI-IRQKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISF 311
GLI QK K + Q SL+ K AAA+R++NR+I+F
Sbjct: 231 GLINAEQKAKVEEMQDKTVSLIKSKKWAAARRERNRIIAF 270
>07_01_0463 + 3502708-3503535
Length = 275
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 282 KRKQNRLISFQNEENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKR 461
K K+N+ +++E++DE KE K +K ++ G + E E +K+
Sbjct: 81 KDKENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDE---EEGKKK 137
Query: 462 EKQVKEKGVHNSTQEEKK 515
EK+ + G ++EKK
Sbjct: 138 EKKKDKDGDEKEGKKEKK 155
>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 168 EGTSGDTPGGLIIRQKDKPADFQFAKPSLLGLDKLAAAKRKQNRLISFQNEENEDEGTN- 344
+GT +P L + D P + ++P G KL + + + + ++E+EGT
Sbjct: 1766 DGTLSSSP--LASQSSDPPKQTKSSEPPSSGPSKLESTSTSDTAMKTSNSSDSEEEGTRH 1823
Query: 345 -VDNVVKERKYRKHNEE 392
+ NVV + ++ H+EE
Sbjct: 1824 FMVNVV-QPQFNLHSEE 1839
>03_02_0109 +
5671418-5671631,5675610-5675690,5676249-5676340,
5676433-5676513,5676594-5676691,5676872-5676953,
5677050-5677088
Length = 228
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 413 TASIGGGFFIVLSVFTFFHHIIHIRSFVLVF 321
T S G GFF+VL + FF ++ FV++F
Sbjct: 158 TISFGAGFFLVLIGWPFFGMLLEAYGFVVLF 188
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 342 NVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK-REKQVKEKGVHNSTQEE 509
N D++ +Y++ E+ Y G+ + E L+E +K REK+ +++ + +EE
Sbjct: 488 NFDSLFASSQYQE-KEKAVLYASGMESRDEEELLEHEKKQREKEEEQRKLERDREEE 543
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 306 SFQNEENEDEGTNVDNVVKERKYRKHNE-ETPTYTGGISEQAR---ERLIERMQKREKQV 473
+F E + E T+ D KER+ R E E EQ R ER +E+ ++RE+Q
Sbjct: 482 NFFGEAEQSERTSSDREEKERQARLEQEQEMKLMEEKKREQRRLEKERELEQQKERERQA 541
Query: 474 KEKGVHNSTQEEKKTQAK 527
E+ +E +A+
Sbjct: 542 MERAT-KEARERASAEAR 558
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 321 ENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKGVHNST 500
E E+E + + +ERK H+E+ E +E+ ++ +++E+Q KEK T
Sbjct: 440 EQEEEMKDKEKGGEERKEEPHHEK--------QEHKKEKEVKEEERKEEQNKEKEEREGT 491
Query: 501 QEEK 512
+E++
Sbjct: 492 EEKQ 495
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +3
Query: 147 EENVHRLEGTSGDTPGGLIIRQKD---KPADFQFAKPSLLGLDKLAAAKRKQNRLISFQN 317
+ +V LE T+GD + + QK+ ++ Q + S L K +Q ++ N
Sbjct: 704 QSSVKELESTNGDLNDKIAVLQKEGSSLASELQQLEASFKNLGNDLEQKFEQISVMQKNN 763
Query: 318 EENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLIERMQK 458
EE E +N+ N + + +K+ T G + + + I +Q+
Sbjct: 764 EELELANSNLQNELAMVQEQKNEAVASTVELGNKLEEQNQQISNLQE 810
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 324 NEDEGTNVDNVVKERKYRK-HNEETPT-YTGGISEQARERLIE---RMQKREKQVKEKGV 488
N + T VD ++K +K N+ T Y GG+SE+ E + + + K++ + K+K V
Sbjct: 148 NTVDDTEVDKKKGKKKKKKVKNDATEELYDGGVSEENDEAVQQSENEVDKKKGKKKKKKV 207
Query: 489 HNSTQEE 509
N EE
Sbjct: 208 KNDPTEE 214
>03_05_0111 -
20919291-20919439,20920128-20920237,20920341-20920466,
20920545-20920632,20920933-20921053,20921159-20921231,
20921399-20921462,20921543-20921739,20921844-20921899,
20922050-20922146,20923731-20923870
Length = 406
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
Frame = +3
Query: 132 TMTDPEE-------NVHRLEGTSGDTPGGLIIRQKDKPADFQFAKPSLLGLDKLAAAKRK 290
TM +P+E V+++ SGD ++ QKD + + ++ LDK +
Sbjct: 50 TMPEPKEIIRRSALEVNKMNLLSGDCAPKSVMEQKDIIGEVPRTQDAIQALDKTISNLEM 109
Query: 291 QNRLISFQNEENEDEGTNV-DNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREK 467
+ EE+E G + ++ K R + T + + R + + +KR K
Sbjct: 110 ELASAKASQEESELNGAPLSESTGKRRYFMVIGINTAFSSRKRRDSLRATWMPQGEKRRK 169
Query: 468 QVKEKGV 488
+EKG+
Sbjct: 170 LEEEKGI 176
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 240 AKPSLLGLDKLAAAKRKQNRLISFQNEENED--EGTNVDNVVKERKYRKHNEE 392
A PS+ D+ +A+RK ++ + + E+ ED G + +RK +K ++E
Sbjct: 33 AAPSMAACDQDCSARRKTSKYFASKTEKEEDTSAGKGTGRGLPKRKLQKVSDE 85
>05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 279 AKRKQNRLISFQNEENEDEGTNVDNVVKER---KYRKHNEETPTYTG-GISEQARERLIE 446
A K NR++SF + E +D +++ + K R N E P G I + +E+L+
Sbjct: 847 ATNKSNRILSFSDSEADDNDSSI-QIEKNRNTVSRGSQNSEAPKRRGRSIFSEEQEKLMR 905
Query: 447 RMQKREK 467
+ ++ K
Sbjct: 906 DLYEKYK 912
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 312 QNEENEDEGTNVDNVVK-ERKYRKHNEETPTYTGGISEQARERLIERMQKR-EKQVKEKG 485
+++E D+ + D K +R R+ E+ T E+ RER IERMQ+R + +KG
Sbjct: 1538 KSKEKADDKYDRDPREKADRTERRRGEDIERPTDKSLER-RERSIERMQERGTDRAPDKG 1596
Query: 486 VHNSTQEEK 512
+ +EE+
Sbjct: 1597 REDRNKEER 1605
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 312 QNEENEDEGTNV-DNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKEKGV 488
+ E++DEG V D V+E + K E+ S++ E E Q E++ KE+G
Sbjct: 111 EESEDDDEGVEVSDEEVEELEEGKGEEK--------SDEVEEG--EEGQDGEEEEKEEGD 160
Query: 489 HNSTQEEKKTQAK 527
+ +EE++T K
Sbjct: 161 EEAAEEEEETDKK 173
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 147 EENVHRLEGTSGDTPGGLIIRQKDKPADFQFAKPSLLGLDKLAAAKRK--QNRLISFQNE 320
+E + E T D ++++ D + K L+G D+ K K +N + E
Sbjct: 206 KEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEE 265
Query: 321 ENEDEGTNVDNVVKERKYRKHNEETPTYTGGISEQARERLI 443
E +D+ ++ KE + NE+ I + +L+
Sbjct: 266 EKKDKEEKLEEKEKENEEENGNEKDKENDNEIEKVKNTKLV 306
>05_06_0076 +
25381814-25381880,25382927-25382967,25383398-25383502,
25383612-25383695,25384069-25384103,25384562-25384647,
25385529-25385594,25385936-25385970
Length = 172
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 369 KYRKHNEETPTYTGGISEQAR---ERLIERMQKREKQVKEKGVHNSTQEEKKTQAK 527
K + H G +EQAR ERL Q+R + K++ + ++E+K +A+
Sbjct: 116 KQKSHERHMKLQEQGKTEQARKDLERLTLIRQQRAEAAKKREEEKAAKDERKAEAR 171
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 348 DNVVKERKYRKHNEETPTYTGGISEQARERLIERMQKREKQVKE 479
D+ KE+ +R+ NE+ T Q R+++ E ++K + VKE
Sbjct: 1512 DDNKKEKAFRRRNEKVFTTAIQNMNQERKQVEESIEKHRQAVKE 1555
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,334,209
Number of Sequences: 37544
Number of extensions: 352018
Number of successful extensions: 1033
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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